The 2.0 version of rSNPBase

Variant report

Variant rs655181
Chromosome Location chr1:84684334-84684335
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:82 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:84652400-84689800 Weak transcription Aorta Aorta
2 chr1:84657600-84708000 Weak transcription Left Ventricle heart
3 chr1:84659000-84685000 Weak transcription Rectal Smooth Muscle rectum
4 chr1:84659000-84700600 Weak transcription Skeletal Muscle Female skeletal muscle
5 chr1:84659000-84700800 Weak transcription Colon Smooth Muscle Colon
6 chr1:84659200-84688400 Weak transcription iPS-20b Cell Line embryonic stem cell
7 chr1:84659400-84685400 Weak transcription Stomach Smooth Muscle stomach
8 chr1:84659800-84701400 Weak transcription NHLF lung
9 chr1:84660600-84686200 Weak transcription Fetal Intestine Small intestine
10 chr1:84660800-84688400 Weak transcription Fetal Brain Male brain
11 chr1:84663200-84684600 Weak transcription Hela-S3 cervix
12 chr1:84665200-84700800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
13 chr1:84665400-84684600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
14 chr1:84665400-84685200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
15 chr1:84665400-84687600 Weak transcription Primary T killer memory cells from peripheral blood blood
16 chr1:84665400-84700600 Weak transcription Colonic Mucosa Colon
17 chr1:84665400-84701000 Weak transcription Fetal Kidney kidney
18 chr1:84665600-84684800 Weak transcription Fetal Adrenal Gland Adrenal Gland
19 chr1:84665800-84684400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
20 chr1:84666000-84689800 Weak transcription Fetal Stomach stomach
21 chr1:84666800-84710200 Weak transcription HSMMtube muscle
22 chr1:84668200-84690000 Weak transcription Primary T helper naive cells from peripheral blood blood
23 chr1:84672600-84685200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
24 chr1:84672600-84685200 Weak transcription Fetal Intestine Large intestine
25 chr1:84672600-84687400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
26 chr1:84672600-84689800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
27 chr1:84672600-84700600 Weak transcription Brain Anterior Caudate brain
28 chr1:84672600-84701000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
29 chr1:84672600-84711200 Weak transcription Brain Substantia Nigra brain
30 chr1:84672800-84685000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr1:84673000-84685200 Weak transcription Liver Liver
32 chr1:84673000-84688200 Weak transcription Brain Angular Gyrus brain
33 chr1:84673000-84689800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
34 chr1:84673000-84700600 Weak transcription HSMM muscle
35 chr1:84673200-84684800 Weak transcription Fetal Muscle Trunk muscle
36 chr1:84673200-84690000 Weak transcription Rectal Mucosa Donor 29 rectum
37 chr1:84675200-84712800 Weak transcription NH-A brain
38 chr1:84675800-84705000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
39 chr1:84677800-84685400 Strong transcription Dnd41 blood
40 chr1:84679400-84685000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
41 chr1:84679600-84684400 Strong transcription Primary hematopoietic stem cells short term culture blood
42 chr1:84679600-84684400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
43 chr1:84679600-84685600 Strong transcription Primary T cells fromperipheralblood blood
44 chr1:84679800-84685000 Strong transcription Primary T cells from cord blood blood
45 chr1:84679800-84685600 Strong transcription Primary T regulatory cells fromperipheralblood blood
46 chr1:84679800-84685800 Strong transcription Primary T helper cells fromperipheralblood blood
47 chr1:84679800-84685800 Strong transcription Fetal Thymus thymus
48 chr1:84680200-84689600 Weak transcription Gastric stomach
49 chr1:84680400-84685600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
50 chr1:84680600-84685400 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood

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Last update: Aug 31, 2015