Variant report

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	TCF7L2	chr1:84485425-84485625	PANC-1	pancreas:	n/a	chr1:84485523-84485533

Variant related genes	Relation type
ENSG00000229486	TF binding region

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs11163916	1.00[EUR][1000 genomes]
rs11802352	1.00[EUR][1000 genomes]
rs11802582	1.00[EUR][1000 genomes]
rs11803089	1.00[EUR][1000 genomes]
rs12070852	1.00[EUR][1000 genomes]
rs3729868	1.00[EUR][1000 genomes]
rs41300502	1.00[EUR][1000 genomes]
rs41300514	1.00[EUR][1000 genomes]
rs41300516	1.00[EUR][1000 genomes]
rs41300534	1.00[EUR][1000 genomes]
rs41301174	1.00[EUR][1000 genomes]
rs61243881	1.00[EUR][1000 genomes]
rs624878	1.00[EUR][1000 genomes]
rs633253	1.00[EUR][1000 genomes]
rs639010	1.00[EUR][1000 genomes]
rs639940	1.00[EUR][1000 genomes]
rs642052	1.00[EUR][1000 genomes]
rs652426	1.00[EUR][1000 genomes]
rs655181	1.00[EUR][1000 genomes]
rs7524666	1.00[YRI][hapmap];0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7524960	0.90[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs7532830	1.00[EUR][1000 genomes]
rs7538094	0.92[YRI][hapmap];0.97[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs7540972	0.93[YRI][hapmap];0.90[AFR][1000 genomes];1.00[EUR][1000 genomes]

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:84484800-84486800	Enhancers	Liver	Liver
2	chr1:84485200-84485800	Enhancers	Brain Substantia Nigra	brain
3	chr1:84485400-84486200	Weak transcription	Stomach Mucosa	stomach
4	chr1:84485600-84485800	Bivalent Enhancer	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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