Variant report

Variant	rs6589777
Chromosome Location	chr11:119668742-119668743
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:119663136..119665675-chr11:119667575..119669290,2	K562	blood:

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs11217511	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs11217512	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs11217513	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs11217515	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs11217524	0.90[CEU][hapmap]
rs11605165	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs1374565	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs2084291	0.83[CEU][hapmap]
rs56116614	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs56220026	0.92[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs7926229	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs7935678	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs7952568	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes]

No data

Chromatin state (count:22 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:119663400-119669000	Bivalent Enhancer	H1 Cell Line	embryonic stem cell
2	chr11:119665200-119672000	Weak transcription	Gastric	stomach
3	chr11:119665400-119668800	Bivalent Enhancer	HUES64 Cell Line	embryonic stem cell
4	chr11:119665400-119669400	Bivalent Enhancer	iPS-20b Cell Line	embryonic stem cell
5	chr11:119665800-119669800	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
6	chr11:119666200-119668800	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
7	chr11:119666200-119669600	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
8	chr11:119666400-119669000	Bivalent Enhancer	HUES48 Cell Line	embryonic stem cell
9	chr11:119666400-119676000	Weak transcription	Right Ventricle	heart
10	chr11:119667000-119669000	Bivalent Enhancer	HUES6 Cell Line	embryonic stem cell
11	chr11:119667200-119669400	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
12	chr11:119667400-119668800	Enhancers	H9 Cell Line	embryonic stem cell
13	chr11:119668000-119669000	Bivalent Enhancer	iPS-18 Cell Line	embryonic stem cell
14	chr11:119668000-119669200	Bivalent Enhancer	iPS-15b Cell Line	embryonic stem cell
15	chr11:119668000-119670800	Weak transcription	Fetal Heart	heart
16	chr11:119668000-119672000	Weak transcription	Spleen	Spleen
17	chr11:119668400-119669000	Bivalent Enhancer	ES-WA7 Cell Line	embryonic stem cell
18	chr11:119668400-119669400	Weak transcription	Brain Germinal Matrix	brain
19	chr11:119668600-119668800	Bivalent Enhancer	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
20	chr11:119668600-119668800	Bivalent Enhancer	H9 Derived Neuron Cultured Cells	ES cell derived
21	chr11:119668600-119669000	Bivalent Enhancer	ES-I3 Cell Line	embryonic stem cell
22	chr11:119668600-119670800	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived

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