Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr5:123070152..123070765-chr5:124595660..124596171,2	K562	blood:

rSNPs within LD-proxies of this variant (count:35)

rs_ID	r²[population]
rs11241799	0.81[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs11740444	0.97[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11748971	0.85[EUR][1000 genomes]
rs13157669	0.87[ASN][1000 genomes]
rs13172476	0.87[ASN][1000 genomes]
rs13176117	0.82[EUR][1000 genomes]
rs13177664	0.87[ASN][1000 genomes]
rs13184952	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs13185858	0.82[ASN][1000 genomes]
rs13186616	0.83[EUR][1000 genomes]
rs1347924	0.80[AFR][1000 genomes];0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1439581	0.87[ASN][1000 genomes]
rs17152498	1.00[JPT][hapmap];0.83[ASN][1000 genomes]
rs17152511	1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs17152519	0.87[ASN][1000 genomes]
rs17152524	0.87[ASN][1000 genomes]
rs17152532	0.87[ASN][1000 genomes]
rs17152545	0.87[ASN][1000 genomes]
rs17152569	0.82[ASN][1000 genomes]
rs17152577	0.87[ASN][1000 genomes]
rs17152579	0.87[ASN][1000 genomes]
rs2408379	0.87[ASN][1000 genomes]
rs34584680	0.83[EUR][1000 genomes]
rs34833831	0.87[ASN][1000 genomes]
rs34871761	0.83[EUR][1000 genomes]
rs34892968	0.82[ASN][1000 genomes]
rs35073242	0.87[ASN][1000 genomes]
rs35108894	0.87[ASN][1000 genomes]
rs35654224	0.87[ASN][1000 genomes]
rs35802525	0.87[ASN][1000 genomes]
rs35914668	0.87[ASN][1000 genomes]
rs36050183	0.87[ASN][1000 genomes]
rs4835868	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs6892733	0.83[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7721989	0.84[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv882823	chr5:124569471-124639468	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:124590600-124596800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
2	chr5:124593200-124609200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
3	chr5:124593400-124596600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
4	chr5:124593400-124596800	Weak transcription	HUES64 Cell Line	embryonic stem cell
5	chr5:124593600-124597400	Weak transcription	HUES48 Cell Line	embryonic stem cell
6	chr5:124593600-124598600	Weak transcription	HUES6 Cell Line	embryonic stem cell
7	chr5:124594000-124597600	Weak transcription	ES-I3 Cell Line	embryonic stem cell

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