Variant report

Variant	rs6601836
Chromosome Location	chr10:4383614-4383615
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr10:4376764..4379078-chr10:4382397..4384956,2	MCF-7	breast:
2	chr10:4319961..4321650-chr10:4382785..4384705,2	MCF-7	breast:
3	chr10:4379011..4380756-chr10:4381166..4383762,2	K562	blood:

Extended variants
information (count: 29 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs10751967	0.90[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10795157	0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10795158	0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10904235	0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10904236	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10904237	0.80[ASN][1000 genomes]
rs10904238	0.81[EUR][1000 genomes]
rs11252474	0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11252476	0.86[ASN][1000 genomes]
rs11252477	0.86[ASN][1000 genomes]
rs12217543	0.86[ASN][1000 genomes]
rs12219673	0.90[ASN][1000 genomes]
rs12782979	0.81[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1571129	0.91[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4261192	0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4265499	0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4272695	0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4550130	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4564225	0.84[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4881317	0.81[ASN][1000 genomes]
rs60075506	0.86[ASN][1000 genomes]
rs6601835	0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7082820	0.83[ASN][1000 genomes]
rs72766472	0.90[ASN][1000 genomes]
rs7900466	0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7902863	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7919885	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs927897	0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs9633757	0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:4377200-4386200	Weak transcription	Aorta	Aorta
2	chr10:4378000-4386200	Weak transcription	Colon Smooth Muscle	Colon
3	chr10:4380400-4386000	Weak transcription	Fetal Heart	heart
4	chr10:4380400-4386200	Weak transcription	Psoas Muscle	Psoas
5	chr10:4380800-4385400	Weak transcription	Fetal Muscle Leg	muscle
6	chr10:4380800-4386200	Weak transcription	Skeletal Muscle Female	skeletal muscle
7	chr10:4382400-4389800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
8	chr10:4383400-4385400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin

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