The 2.0 version of rSNPBase

Variant report

Variant rs6658856
Chromosome Location chr1:95421111-95421112
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:63 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:95404200-95421400 Weak transcription Aorta Aorta
2 chr1:95410600-95421600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
3 chr1:95413200-95427600 Weak transcription Colonic Mucosa Colon
4 chr1:95415400-95422400 Enhancers Fetal Adrenal Gland Adrenal Gland
5 chr1:95415800-95421200 Weak transcription Esophagus oesophagus
6 chr1:95415800-95421200 Weak transcription HSMMtube muscle
7 chr1:95415800-95428400 Weak transcription Lung lung
8 chr1:95416000-95421200 Weak transcription Small Intestine intestine
9 chr1:95416000-95421400 Weak transcription Stomach Mucosa stomach
10 chr1:95416000-95427400 Weak transcription A549 lung
11 chr1:95416200-95421200 Weak transcription Fetal Thymus thymus
12 chr1:95417600-95421200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
13 chr1:95417600-95421200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
14 chr1:95417600-95421200 Weak transcription NHDF-Ad bronchial
15 chr1:95417600-95421400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
16 chr1:95417800-95421400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
17 chr1:95417800-95424600 Enhancers HepG2 liver
18 chr1:95418800-95421800 Enhancers Ovary ovary
19 chr1:95419200-95421800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
20 chr1:95419200-95422000 Enhancers Fetal Stomach stomach
21 chr1:95419400-95421800 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
22 chr1:95419400-95421800 Enhancers ES-UCSF4 Cell Line embryonic stem cell
23 chr1:95419400-95421800 Enhancers Fetal Muscle Leg muscle
24 chr1:95419400-95421800 Enhancers Left Ventricle heart
25 chr1:95419400-95421800 Enhancers Stomach Smooth Muscle stomach
26 chr1:95419400-95422000 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr1:95419400-95422000 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
28 chr1:95419400-95422000 Enhancers Breast Myoepithelial Primary Cells Breast
29 chr1:95419400-95422000 Enhancers Colon Smooth Muscle Colon
30 chr1:95419400-95422000 Enhancers Rectal Smooth Muscle rectum
31 chr1:95419400-95422000 Enhancers HUVEC blood vessel
32 chr1:95419400-95422400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
33 chr1:95419400-95422800 Enhancers Duodenum Mucosa Duodenum
34 chr1:95419600-95421600 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
35 chr1:95419600-95423200 Weak transcription Dnd41 blood
36 chr1:95419800-95421200 Weak transcription Sigmoid Colon Sigmoid Colon
37 chr1:95419800-95421600 Enhancers iPS-15b Cell Line embryonic stem cell
38 chr1:95419800-95421800 Enhancers iPS-20b Cell Line embryonic stem cell
39 chr1:95419800-95422000 Enhancers Fetal Intestine Small intestine
40 chr1:95420000-95421800 Enhancers Adipose Nuclei Adipose
41 chr1:95420000-95421800 Enhancers Right Atrium heart
42 chr1:95420000-95421800 Enhancers Right Ventricle heart
43 chr1:95420000-95422000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
44 chr1:95420000-95422000 Enhancers Rectal Mucosa Donor 29 rectum
45 chr1:95420200-95421600 Enhancers Skeletal Muscle Male skeletal muscle
46 chr1:95420400-95421400 Weak transcription Fetal Kidney kidney
47 chr1:95420400-95421400 Weak transcription Fetal Lung lung
48 chr1:95420400-95421400 Weak transcription NHLF lung
49 chr1:95420400-95422800 Enhancers Liver Liver
50 chr1:95420400-95423000 Enhancers Fetal Heart heart

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Last update: Aug 31, 2015