The 2.0 version of rSNPBase

Variant report

Variant rs6698310
Chromosome Location chr1:95419429-95419430
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:64 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:95404200-95421400 Weak transcription Aorta Aorta
2 chr1:95408400-95420000 Weak transcription Rectal Mucosa Donor 29 rectum
3 chr1:95410600-95421600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
4 chr1:95411800-95419800 Weak transcription Cortex derived primary cultured neurospheres brain
5 chr1:95413000-95420200 Weak transcription Skeletal Muscle Male skeletal muscle
6 chr1:95413200-95427600 Weak transcription Colonic Mucosa Colon
7 chr1:95413400-95421000 Weak transcription Pancreas Pancrea
8 chr1:95413600-95420000 Weak transcription Right Atrium heart
9 chr1:95415400-95422400 Enhancers Fetal Adrenal Gland Adrenal Gland
10 chr1:95415800-95420000 Weak transcription Right Ventricle heart
11 chr1:95415800-95421200 Weak transcription Esophagus oesophagus
12 chr1:95415800-95421200 Weak transcription HSMMtube muscle
13 chr1:95415800-95428400 Weak transcription Lung lung
14 chr1:95416000-95419600 Weak transcription NHLF lung
15 chr1:95416000-95420000 Weak transcription Rectal Mucosa Donor 31 rectum
16 chr1:95416000-95421200 Weak transcription Small Intestine intestine
17 chr1:95416000-95421400 Weak transcription Stomach Mucosa stomach
18 chr1:95416000-95427400 Weak transcription A549 lung
19 chr1:95416200-95421000 Weak transcription Fetal Intestine Large intestine
20 chr1:95416200-95421200 Weak transcription Fetal Thymus thymus
21 chr1:95416600-95420000 Weak transcription Osteobl bone
22 chr1:95416800-95420200 Weak transcription NH-A brain
23 chr1:95416800-95420800 Enhancers Placenta Placenta
24 chr1:95417200-95420800 Weak transcription Fetal Muscle Trunk muscle
25 chr1:95417400-95420000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
26 chr1:95417600-95420000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
27 chr1:95417600-95420000 Weak transcription Adipose Nuclei Adipose
28 chr1:95417600-95421200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
29 chr1:95417600-95421200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
30 chr1:95417600-95421200 Weak transcription NHDF-Ad bronchial
31 chr1:95417600-95421400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
32 chr1:95417800-95420000 Weak transcription Spleen Spleen
33 chr1:95417800-95421400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
34 chr1:95417800-95424600 Enhancers HepG2 liver
35 chr1:95418000-95419800 Enhancers Sigmoid Colon Sigmoid Colon
36 chr1:95418600-95420400 Weak transcription Liver Liver
37 chr1:95418800-95421800 Enhancers Ovary ovary
38 chr1:95419200-95420600 Enhancers Placenta Amnion Placenta Amnion
39 chr1:95419200-95421800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
40 chr1:95419200-95422000 Enhancers Fetal Stomach stomach
41 chr1:95419400-95419600 Enhancers H9 Cell Line embryonic stem cell
42 chr1:95419400-95419600 Flanking Active TSS Fetal Heart heart
43 chr1:95419400-95419600 Enhancers Dnd41 blood
44 chr1:95419400-95420400 Enhancers HUES6 Cell Line embryonic stem cell
45 chr1:95419400-95420400 Enhancers Duodenum Smooth Muscle Duodenum
46 chr1:95419400-95420400 Enhancers Fetal Kidney kidney
47 chr1:95419400-95420400 Enhancers Fetal Lung lung
48 chr1:95419400-95420600 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
49 chr1:95419400-95420800 Enhancers ES-I3 Cell Line embryonic stem cell
50 chr1:95419400-95420800 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived

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Last update: Aug 31, 2015