Variant report

Variant	rs66613685
Chromosome Location	chr7:124706730-124706731
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:124611698..124614462-chr7:124706318..124708451,2	K562	blood:
2	chr7:124704797..124707787-chr7:124709672..124712293,2	K562	blood:

Extended variants
information (count: 40 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:35)

rs_ID	r²[population]
rs10429002	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28495399	0.86[EUR][1000 genomes]
rs56027755	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs56201984	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs56814856	0.86[EUR][1000 genomes]
rs57238558	0.86[EUR][1000 genomes]
rs58951741	0.86[EUR][1000 genomes]
rs59925676	0.86[EUR][1000 genomes]
rs60625314	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs60905609	0.86[EUR][1000 genomes]
rs61037807	0.86[EUR][1000 genomes]
rs61043257	0.86[EUR][1000 genomes]
rs61227096	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs61429625	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs61449025	0.86[EUR][1000 genomes]
rs61484079	0.86[EUR][1000 genomes]
rs61598567	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs66597683	0.86[EUR][1000 genomes]
rs66712671	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs67066083	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs67211225	0.86[EUR][1000 genomes]
rs67449341	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs67501403	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs67504575	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs67573953	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs67617850	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs67652374	0.86[EUR][1000 genomes]
rs68032029	0.86[EUR][1000 genomes]
rs73227528	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73432438	0.86[EUR][1000 genomes]
rs73438462	0.90[AMR][1000 genomes]
rs73438468	0.90[AMR][1000 genomes]
rs73438471	0.90[AMR][1000 genomes]
rs73438475	0.90[AMR][1000 genomes]
rs73438483	0.90[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv429809	chr7:123937674-124835925	Enhancers Strong transcription Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Weak transcription Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	49 gene(s)	inside rSNPs	diseases
2	nsv889139	chr7:124600505-124767295	Enhancers Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases
3	esv3394090	chr7:124602150-124900799	Enhancers Flanking Active TSS ZNF genes & repeats Weak transcription Active TSS Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	35 gene(s)	inside rSNPs	diseases
4	nsv464708	chr7:124703756-124805279	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases
5	nsv608344	chr7:124703756-124805279	Enhancers Weak transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:124702200-124712200	Weak transcription	Placenta Amnion	Placenta Amnion

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