The 2.0 version of rSNPBase

Variant report

Variant rs6665807
Chromosome Location chr1:214699375-214699376
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:76 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:214665400-214705400 Weak transcription Right Ventricle heart
2 chr1:214669800-214700400 Weak transcription Aorta Aorta
3 chr1:214688400-214706200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
4 chr1:214688400-214710600 Weak transcription Spleen Spleen
5 chr1:214690600-214705600 Weak transcription Ovary ovary
6 chr1:214690600-214705600 Weak transcription Pancreas Pancrea
7 chr1:214691400-214705600 Weak transcription Placenta Placenta
8 chr1:214692400-214710600 Weak transcription HUVEC blood vessel
9 chr1:214693000-214701000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
10 chr1:214694400-214706400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr1:214694600-214705400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
12 chr1:214696200-214701000 Weak transcription Fetal Heart heart
13 chr1:214696400-214700800 Enhancers Psoas Muscle Psoas
14 chr1:214697000-214701200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
15 chr1:214697200-214700000 Weak transcription Left Ventricle heart
16 chr1:214697200-214701400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
17 chr1:214697400-214702400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
18 chr1:214697600-214700000 Enhancers Muscle Satellite Cultured Cells --
19 chr1:214697600-214701200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
20 chr1:214697600-214701200 Enhancers NH-A brain
21 chr1:214697800-214699400 Enhancers Primary monocytes fromperipheralblood blood
22 chr1:214697800-214699400 Enhancers Adipose Nuclei Adipose
23 chr1:214697800-214699400 Enhancers Fetal Muscle Leg muscle
24 chr1:214697800-214699600 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
25 chr1:214697800-214699600 Enhancers Fetal Thymus thymus
26 chr1:214697800-214700000 Enhancers Hela-S3 cervix
27 chr1:214697800-214701400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
28 chr1:214697800-214706000 Weak transcription Lung lung
29 chr1:214698000-214699400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
30 chr1:214698000-214699400 Enhancers Primary hematopoietic stem cells blood
31 chr1:214698000-214699400 Weak transcription Right Atrium heart
32 chr1:214698000-214700600 Enhancers Breast Myoepithelial Primary Cells Breast
33 chr1:214698000-214704800 Weak transcription Fetal Adrenal Gland Adrenal Gland
34 chr1:214698200-214699400 Enhancers ES-I3 Cell Line embryonic stem cell
35 chr1:214698200-214699400 Enhancers Primary hematopoietic stem cells short term culture blood
36 chr1:214698200-214699400 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
37 chr1:214698200-214699400 Enhancers Fetal Kidney kidney
38 chr1:214698200-214699600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
39 chr1:214698200-214699800 Enhancers Stomach Mucosa stomach
40 chr1:214698200-214700000 Enhancers Colon Smooth Muscle Colon
41 chr1:214698200-214700000 Enhancers HSMM muscle
42 chr1:214698200-214700000 Enhancers NHLF lung
43 chr1:214698200-214700200 Enhancers HMEC breast
44 chr1:214698400-214699400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
45 chr1:214698400-214699800 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
46 chr1:214698400-214700000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
47 chr1:214698400-214700200 Enhancers A549 lung
48 chr1:214698400-214700800 Enhancers ES-WA7 Cell Line embryonic stem cell
49 chr1:214698400-214701400 Enhancers NHDF-Ad bronchial
50 chr1:214698600-214699400 Enhancers Fetal Stomach stomach

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Last update: Aug 31, 2015