The 2.0 version of rSNPBase

Variant report

Variant rs6667106
Chromosome Location chr1:59187817-59187818
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:59176800-59188800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr1:59180600-59192800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr1:59183000-59189400 Enhancers Breast Myoepithelial Primary Cells Breast
4 chr1:59183400-59197600 Weak transcription Aorta Aorta
5 chr1:59183600-59193000 Weak transcription ES-WA7 Cell Line embryonic stem cell
6 chr1:59184000-59192600 Weak transcription HUES6 Cell Line embryonic stem cell
7 chr1:59184200-59188600 Weak transcription ES-I3 Cell Line embryonic stem cell
8 chr1:59184600-59192200 Weak transcription Primary neutrophils fromperipheralblood blood
9 chr1:59184600-59193000 Weak transcription Placenta Amnion Placenta Amnion
10 chr1:59184800-59188200 Weak transcription Colon Smooth Muscle Colon
11 chr1:59184800-59188200 Weak transcription Rectal Smooth Muscle rectum
12 chr1:59185000-59188800 Weak transcription Primary T killer memory cells from peripheral blood blood
13 chr1:59185200-59192400 Weak transcription Primary hematopoietic stem cells blood
14 chr1:59185400-59188400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
15 chr1:59185400-59188400 Weak transcription Duodenum Smooth Muscle Duodenum
16 chr1:59185400-59190200 Weak transcription Primary hematopoietic stem cells short term culture blood
17 chr1:59185800-59189000 Enhancers HMEC breast
18 chr1:59185800-59189200 Weak transcription Dnd41 blood
19 chr1:59185800-59193200 Weak transcription Left Ventricle heart
20 chr1:59185800-59193200 Weak transcription Spleen Spleen
21 chr1:59186000-59189000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
22 chr1:59186000-59190200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
23 chr1:59186200-59189000 Enhancers Muscle Satellite Cultured Cells --
24 chr1:59186200-59189000 Enhancers Osteobl bone
25 chr1:59186800-59188000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
26 chr1:59187000-59189000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
27 chr1:59187000-59189000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
28 chr1:59187200-59188800 Weak transcription Esophagus oesophagus
29 chr1:59187200-59192400 Weak transcription NH-A brain
30 chr1:59187400-59188400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
31 chr1:59187600-59188800 Weak transcription Right Atrium heart
32 chr1:59187600-59191800 Weak transcription HUVEC blood vessel
33 chr1:59187600-59192400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
34 chr1:59187600-59192400 Weak transcription NHDF-Ad bronchial
35 chr1:59187600-59192400 Weak transcription NHEK skin
36 chr1:59187600-59192600 Weak transcription Fetal Adrenal Gland Adrenal Gland
37 chr1:59187800-59188200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
38 chr1:59187800-59188200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
39 chr1:59187800-59188800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell

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Last update: Aug 31, 2015