The 2.0 version of rSNPBase

Variant report

Variant rs66712119
Chromosome Location chr4:6965428-6965429
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:109 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:6928000-6969600 Weak transcription Aorta Aorta
2 chr4:6945000-6970200 Weak transcription Hela-S3 cervix
3 chr4:6945800-6965800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
4 chr4:6946600-6969000 Weak transcription Dnd41 blood
5 chr4:6954400-6965800 Weak transcription Primary T regulatory cells fromperipheralblood blood
6 chr4:6955800-6976000 Weak transcription Rectal Smooth Muscle rectum
7 chr4:6956000-6967000 Weak transcription Psoas Muscle Psoas
8 chr4:6956000-6976000 Weak transcription Colon Smooth Muscle Colon
9 chr4:6956400-6969200 Weak transcription K562 blood
10 chr4:6957600-6970400 Weak transcription Placenta Amnion Placenta Amnion
11 chr4:6957600-6973800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
12 chr4:6957600-6976000 Weak transcription Fetal Lung lung
13 chr4:6957800-6976000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
14 chr4:6958400-6975800 Weak transcription Duodenum Smooth Muscle Duodenum
15 chr4:6958800-6967400 Weak transcription Thymus Thymus
16 chr4:6958800-6969400 Weak transcription Breast Myoepithelial Primary Cells Breast
17 chr4:6959200-6968800 Weak transcription Primary T cells from cord blood blood
18 chr4:6959400-6967200 Weak transcription Ovary ovary
19 chr4:6962200-6965600 Enhancers Gastric stomach
20 chr4:6962200-6969600 Weak transcription Fetal Brain Female brain
21 chr4:6962400-6966200 Enhancers Fetal Muscle Trunk muscle
22 chr4:6962400-6967800 Enhancers Fetal Muscle Leg muscle
23 chr4:6962400-6968800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
24 chr4:6962600-6968200 Enhancers Skeletal Muscle Male skeletal muscle
25 chr4:6962600-6968400 Enhancers Liver Liver
26 chr4:6963000-6966600 Enhancers Primary Natural Killer cells fromperipheralblood blood
27 chr4:6963000-6967400 Genic enhancers Fetal Intestine Small intestine
28 chr4:6963000-6968600 Enhancers Skeletal Muscle Female skeletal muscle
29 chr4:6963200-6965600 Enhancers Primary B cells from cord blood blood
30 chr4:6963200-6965800 Enhancers Primary B cells from peripheral blood blood
31 chr4:6963200-6967400 Enhancers Primary T helper cells fromperipheralblood blood
32 chr4:6963400-6965600 Enhancers Placenta Placenta
33 chr4:6963600-6966200 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
34 chr4:6963600-6967600 Enhancers HepG2 liver
35 chr4:6963600-6968200 Enhancers Primary T helper cells PMA-I stimulated --
36 chr4:6963800-6965600 Enhancers Sigmoid Colon Sigmoid Colon
37 chr4:6963800-6966400 Enhancers Duodenum Mucosa Duodenum
38 chr4:6963800-6968000 Enhancers Fetal Adrenal Gland Adrenal Gland
39 chr4:6964000-6965600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
40 chr4:6964000-6966800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
41 chr4:6964000-6967600 Enhancers Primary T cells fromperipheralblood blood
42 chr4:6964000-6967600 Enhancers Fetal Intestine Large intestine
43 chr4:6964000-6967800 Enhancers Primary monocytes fromperipheralblood blood
44 chr4:6964200-6965600 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
45 chr4:6964200-6969000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
46 chr4:6964200-6969600 Weak transcription Esophagus oesophagus
47 chr4:6964200-6976000 Weak transcription Brain Germinal Matrix brain
48 chr4:6964400-6965800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
49 chr4:6964400-6967000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
50 chr4:6964400-6968000 Enhancers HSMM muscle

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Last update: Aug 31, 2015