The 2.0 version of rSNPBase

Variant report

Variant rs67245546
Chromosome Location chr4:6947164-6947165
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:89 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:6928000-6969600 Weak transcription Aorta Aorta
2 chr4:6939200-6947200 Enhancers HUES6 Cell Line embryonic stem cell
3 chr4:6939200-6948000 Enhancers H1 Cell Line embryonic stem cell
4 chr4:6941400-6947200 Enhancers Fetal Adrenal Gland Adrenal Gland
5 chr4:6941800-6947800 Enhancers HUES64 Cell Line embryonic stem cell
6 chr4:6942000-6948000 Enhancers iPS-18 Cell Line embryonic stem cell
7 chr4:6942200-6947400 Enhancers Fetal Intestine Large intestine
8 chr4:6943200-6947200 Enhancers Skeletal Muscle Male skeletal muscle
9 chr4:6943800-6955400 Weak transcription Brain Substantia Nigra brain
10 chr4:6944200-6947200 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
11 chr4:6944400-6949800 Weak transcription Fetal Lung lung
12 chr4:6944600-6947200 Enhancers Primary T helper naive cells from peripheral blood blood
13 chr4:6944600-6947800 Enhancers Primary T helper cells PMA-I stimulated --
14 chr4:6944800-6947400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
15 chr4:6944800-6955400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
16 chr4:6945000-6947200 Enhancers Primary T killer naive cells fromperipheralblood blood
17 chr4:6945000-6949000 Genic enhancers Fetal Intestine Small intestine
18 chr4:6945000-6949600 Weak transcription Fetal Kidney kidney
19 chr4:6945000-6955400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
20 chr4:6945000-6970200 Weak transcription Hela-S3 cervix
21 chr4:6945200-6955600 Weak transcription Fetal Brain Female brain
22 chr4:6945400-6953600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
23 chr4:6945400-6955400 Weak transcription Fetal Stomach stomach
24 chr4:6945600-6949800 Weak transcription Sigmoid Colon Sigmoid Colon
25 chr4:6945600-6952800 Weak transcription Esophagus oesophagus
26 chr4:6945600-6952800 Weak transcription K562 blood
27 chr4:6945600-6953000 Weak transcription Primary B cells from peripheral blood blood
28 chr4:6945600-6953600 Weak transcription GM12878-XiMat blood
29 chr4:6945600-6955600 Weak transcription Left Ventricle heart
30 chr4:6945800-6953600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
31 chr4:6945800-6965800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
32 chr4:6946000-6947200 Strong transcription HepG2 liver
33 chr4:6946000-6949800 Weak transcription Rectal Smooth Muscle rectum
34 chr4:6946000-6953000 Weak transcription Primary T killer memory cells from peripheral blood blood
35 chr4:6946200-6947200 Enhancers H9 Cell Line embryonic stem cell
36 chr4:6946200-6947200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
37 chr4:6946200-6947200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
38 chr4:6946400-6955400 Weak transcription NHLF lung
39 chr4:6946600-6947200 Enhancers ES-WA7 Cell Line embryonic stem cell
40 chr4:6946600-6947200 Strong transcription Primary T cells from cord blood blood
41 chr4:6946600-6947200 Enhancers Duodenum Mucosa Duodenum
42 chr4:6946600-6949000 Weak transcription Fetal Muscle Trunk muscle
43 chr4:6946600-6949600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
44 chr4:6946600-6953000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
45 chr4:6946600-6955200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
46 chr4:6946600-6955400 Weak transcription Stomach Smooth Muscle stomach
47 chr4:6946600-6955800 Weak transcription Fetal Brain Male brain
48 chr4:6946600-6969000 Weak transcription Dnd41 blood
49 chr4:6946800-6947200 Weak transcription Primary hematopoietic stem cells short term culture blood
50 chr4:6946800-6947200 Enhancers Rectal Mucosa Donor 29 rectum

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Last update: Aug 31, 2015