Variant report

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs10782606	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10873870	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1473472	0.96[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1486933	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2065795	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs3011990	0.87[ASN][1000 genomes]
rs479650	0.87[ASN][1000 genomes]
rs482598	0.81[ASN][1000 genomes]
rs483441	0.85[ASN][1000 genomes]
rs495796	0.85[EUR][1000 genomes]
rs503329	0.87[ASN][1000 genomes]
rs505931	0.80[EUR][1000 genomes]
rs517036	0.84[EUR][1000 genomes]
rs519797	0.81[ASN][1000 genomes]
rs527924	0.86[EUR][1000 genomes]
rs527974	0.87[ASN][1000 genomes]
rs531773	0.87[ASN][1000 genomes]
rs533097	0.87[ASN][1000 genomes]
rs536913	0.82[ASN][1000 genomes]
rs560520	0.87[ASN][1000 genomes]
rs567250	0.84[EUR][1000 genomes]
rs569850	0.85[ASN][1000 genomes]
rs572623	0.85[ASN][1000 genomes]
rs573657	0.85[ASN][1000 genomes]
rs580390	0.85[EUR][1000 genomes]
rs6674758	0.91[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7414129	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv870621	chr1:76620313-76997071	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	esv1801297	chr1:76673530-76686142	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:76674600-76676600	Enhancers	Primary T cells from cord blood	blood
2	chr1:76674600-76676800	Enhancers	Fetal Thymus	thymus
3	chr1:76674800-76676800	Enhancers	Thymus	Thymus
4	chr1:76675000-76676600	Enhancers	Primary T helper naive cells fromperipheralblood	blood
5	chr1:76675200-76677600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
6	chr1:76675800-76677000	Weak transcription	Lung	lung

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