Variant report
| Variant | rs6672933 |
|---|---|
| Chromosome Location | chr1:165591809-165591810 |
| allele | C/G |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:3)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
(count:3 , 50 per page) page:
1
| No data |
| No data |
| No data |
| Variant related genes | Relation type |
|---|---|
| ENSG00000143198 | Chromatin interaction |
rSNPs within LD-proxies of this variant (count:12)
| rs_ID | r2[population] |
|---|---|
| rs10918220 | 1.00[CEU][hapmap];0.93[AMR][1000 genomes];0.91[EUR][1000 genomes] |
| rs10918226 | 1.00[ASN][1000 genomes] |
| rs1538114 | 0.90[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs4147147 | 1.00[AFR][1000 genomes];0.93[AMR][1000 genomes];0.89[EUR][1000 genomes] |
| rs4147148 | 1.00[CEU][hapmap];1.00[AFR][1000 genomes];0.93[AMR][1000 genomes];0.89[EUR][1000 genomes] |
| rs6657788 | 0.86[CEU][hapmap];0.93[AMR][1000 genomes] |
| rs6658200 | 0.93[AMR][1000 genomes];0.91[EUR][1000 genomes] |
| rs6677016 | 0.88[EUR][1000 genomes] |
| rs6679939 | 0.85[CEU][hapmap];1.00[AFR][1000 genomes];0.93[AMR][1000 genomes];0.89[EUR][1000 genomes] |
| rs7537290 | 1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs9333468 | 1.00[ASN][1000 genomes] |
| rs9333476 | 1.00[ASN][1000 genomes] |
| No data |
Chromatin state (count:0 , 50 per page) page:
| No data |
