Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:165577926..165581441-chr1:165598731..165602134,4	MCF-7	breast:

Variant related genes	Relation type
ENSG00000143198	Chromatin interaction

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10918226	1.00[CHB][hapmap]
rs1538114	0.81[CEU][hapmap];1.00[CHB][hapmap];0.81[EUR][1000 genomes]
rs1913839	1.00[ASN][1000 genomes]
rs206235	1.00[ASN][1000 genomes]
rs2459239	1.00[ASN][1000 genomes]
rs2478265	1.00[ASN][1000 genomes]
rs2485402	1.00[ASN][1000 genomes]
rs3856210	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs407380	1.00[ASN][1000 genomes]
rs4147147	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4147148	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs417973	1.00[ASN][1000 genomes]
rs425833	1.00[ASN][1000 genomes]
rs6657788	0.92[CEU][hapmap];1.00[CHB][hapmap];0.86[AMR][1000 genomes]
rs6658200	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6672933	1.00[CEU][hapmap];0.93[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs6677016	0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6679939	0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6692264	1.00[CHB][hapmap]
rs7537290	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs9333476	1.00[CHB][hapmap]
rs952375	0.88[EUR][1000 genomes]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:165568200-165579600	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin

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