Variant report

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10918220	0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10918226	1.00[CHB][hapmap]
rs1538114	1.00[CHB][hapmap]
rs1913839	1.00[ASN][1000 genomes]
rs206235	1.00[ASN][1000 genomes]
rs2459239	1.00[ASN][1000 genomes]
rs2478265	1.00[ASN][1000 genomes]
rs2485402	1.00[ASN][1000 genomes]
rs3856210	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs407380	1.00[ASN][1000 genomes]
rs4147147	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4147148	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs417973	1.00[ASN][1000 genomes]
rs425833	1.00[ASN][1000 genomes]
rs6657788	0.85[CEU][hapmap];1.00[CHB][hapmap];0.86[AMR][1000 genomes]
rs6658200	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6672933	0.85[CEU][hapmap];1.00[AFR][1000 genomes];0.93[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs6677016	0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6692264	1.00[CHB][hapmap]
rs7537290	1.00[AFR][1000 genomes];0.88[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs9333476	1.00[CHB][hapmap]
rs952375	0.90[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv429902	chr1:165531342-165574342	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:165547400-165566800	Weak transcription	Psoas Muscle	Psoas
2	chr1:165562800-165566600	Weak transcription	Pancreatic Islets	Pancreatic Islet
3	chr1:165563000-165564200	Enhancers	Brain Germinal Matrix	brain

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