The 2.0 version of rSNPBase

Variant report

Variant rs6673379
Chromosome Location chr1:114157806-114157807
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:48 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:114100600-114173400 Weak transcription Gastric stomach
2 chr1:114119200-114172400 Weak transcription Pancreas Pancrea
3 chr1:114119200-114173000 Weak transcription Sigmoid Colon Sigmoid Colon
4 chr1:114124400-114172400 Weak transcription Aorta Aorta
5 chr1:114134600-114166400 Weak transcription Hela-S3 cervix
6 chr1:114136800-114158800 Weak transcription Stomach Smooth Muscle stomach
7 chr1:114139800-114160000 Weak transcription Rectal Smooth Muscle rectum
8 chr1:114140600-114162200 Weak transcription NHDF-Ad bronchial
9 chr1:114140600-114172800 Weak transcription Colonic Mucosa Colon
10 chr1:114140800-114162600 Weak transcription Rectal Mucosa Donor 29 rectum
11 chr1:114141000-114162600 Weak transcription Fetal Intestine Large intestine
12 chr1:114141200-114162200 Weak transcription Rectal Mucosa Donor 31 rectum
13 chr1:114141400-114162400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
14 chr1:114145600-114160800 Weak transcription Fetal Intestine Small intestine
15 chr1:114146200-114163200 Weak transcription Fetal Lung lung
16 chr1:114147200-114163400 Weak transcription Duodenum Mucosa Duodenum
17 chr1:114151400-114172600 Weak transcription Ovary ovary
18 chr1:114151800-114166400 Weak transcription Breast Myoepithelial Primary Cells Breast
19 chr1:114153000-114163600 Weak transcription Fetal Kidney kidney
20 chr1:114153600-114168400 Weak transcription Fetal Muscle Trunk muscle
21 chr1:114154000-114172400 Weak transcription Fetal Stomach stomach
22 chr1:114155400-114162000 Weak transcription Liver Liver
23 chr1:114156200-114170000 Weak transcription Small Intestine intestine
24 chr1:114156600-114158600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
25 chr1:114156600-114158600 Genic enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
26 chr1:114156800-114158400 Enhancers Fetal Heart heart
27 chr1:114157000-114158000 Weak transcription HUES64 Cell Line embryonic stem cell
28 chr1:114157000-114158000 Enhancers Fetal Adrenal Gland Adrenal Gland
29 chr1:114157200-114158800 Enhancers HUVEC blood vessel
30 chr1:114157200-114159000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
31 chr1:114157200-114159200 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
32 chr1:114157400-114159000 Enhancers Brain Germinal Matrix brain
33 chr1:114157400-114159200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
34 chr1:114157400-114159400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
35 chr1:114157400-114159600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
36 chr1:114157400-114160400 Enhancers NHEK skin
37 chr1:114157400-114166400 Weak transcription Duodenum Smooth Muscle Duodenum
38 chr1:114157600-114158000 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
39 chr1:114157600-114158400 Enhancers Fetal Brain Female brain
40 chr1:114157600-114159000 Enhancers ES-I3 Cell Line embryonic stem cell
41 chr1:114157600-114159200 Enhancers HMEC breast
42 chr1:114157600-114163800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
43 chr1:114157800-114158600 Enhancers Muscle Satellite Cultured Cells --
44 chr1:114157800-114158600 Enhancers HSMM muscle
45 chr1:114157800-114159000 Enhancers NH-A brain
46 chr1:114157800-114159200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
47 chr1:114157800-114159400 Enhancers Osteobl bone
48 chr1:114157800-114161800 Enhancers Cortex derived primary cultured neurospheres brain

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015