Variant report

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs11118662	0.82[ASN][1000 genomes]
rs11118663	0.86[ASN][1000 genomes]
rs11118664	0.84[ASN][1000 genomes]
rs12120171	0.89[ASN][1000 genomes]
rs12122167	0.89[ASN][1000 genomes]
rs12124230	0.89[ASN][1000 genomes]
rs12126632	0.89[ASN][1000 genomes]
rs12128432	0.91[ASN][1000 genomes]
rs12140672	0.80[ASN][1000 genomes]
rs1341619	0.86[ASN][1000 genomes]
rs1442462	1.00[ASN][1000 genomes]
rs1539140	0.86[ASN][1000 genomes]
rs17009529	0.80[ASN][1000 genomes]
rs17009652	0.96[ASN][1000 genomes]
rs2039956	0.80[ASN][1000 genomes]
rs4420085	0.80[ASN][1000 genomes]
rs4846339	0.81[ASN][1000 genomes]
rs4846687	0.91[AFR][1000 genomes];0.88[AMR][1000 genomes];0.81[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4846690	0.93[ASN][1000 genomes]
rs4846694	0.87[ASN][1000 genomes]
rs57489853	0.80[ASN][1000 genomes]
rs59098418	0.80[ASN][1000 genomes]
rs6686637	0.84[ASN][1000 genomes]
rs67635817	0.80[ASN][1000 genomes]
rs7522767	0.93[ASN][1000 genomes]
rs7539794	0.86[ASN][1000 genomes]
rs7549116	0.98[ASN][1000 genomes]
rs9431431	0.89[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv997685	chr1:220993527-221863416	Enhancers Weak transcription Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	28 gene(s)	inside rSNPs	diseases
2	nsv535299	chr1:220993527-221863416	Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription Bivalent Enhancer Bivalent/Poised TSS Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	28 gene(s)	inside rSNPs	diseases
3	nsv873199	chr1:221136672-221451217	Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:221369800-221370800	Enhancers	Placenta	Placenta

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