Variant report

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs10889787	0.90[ASN][1000 genomes]
rs10889788	0.90[ASN][1000 genomes]
rs10889789	0.88[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs11209352	0.85[AFR][1000 genomes]
rs12065097	0.81[AFR][1000 genomes]
rs12075697	0.96[AFR][1000 genomes]
rs12082973	0.82[AFR][1000 genomes]
rs12088265	0.96[AFR][1000 genomes]
rs1388654	0.87[ASN][1000 genomes]
rs1492064	0.90[ASN][1000 genomes]
rs1844937	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4625320	1.00[ASN][1000 genomes]
rs4926377	0.86[ASN][1000 genomes]
rs4926378	0.87[ASN][1000 genomes]
rs6588337	0.95[ASN][1000 genomes]
rs6656449	0.89[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6672452	1.00[ASN][1000 genomes]
rs6694895	0.86[ASN][1000 genomes]
rs699229	0.83[AFR][1000 genomes]
rs72680408	0.85[AFR][1000 genomes]
rs7523563	0.86[ASN][1000 genomes]
rs7527747	0.97[ASN][1000 genomes]
rs7531243	0.86[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7534385	0.90[ASN][1000 genomes]
rs854260	0.83[AFR][1000 genomes]
rs854272	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs854273	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs9326085	0.81[AMR][1000 genomes];0.97[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv527722	chr1:69212053-69323222	Enhancers Weak transcription Flanking Active TSS Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:69274200-69278200	Weak transcription	Brain Anterior Caudate	brain
2	chr1:69274400-69279800	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived

Quick Search: