Variant report

Variant rs6687045
Chromosome Location chr1:113393243-113393244
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:47 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:113388600-113394600 Weak transcription Hela-S3 cervix
2 chr1:113391800-113393600 Flanking Active TSS HUVEC blood vessel
3 chr1:113391800-113393800 Enhancers Fetal Brain Male brain
4 chr1:113391800-113394200 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
5 chr1:113391800-113394800 Active TSS ES-I3 Cell Line embryonic stem cell
6 chr1:113392000-113393400 Flanking Active TSS H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
7 chr1:113392000-113393400 Active TSS Brain Inferior Temporal Lobe brain
8 chr1:113392000-113393600 Active TSS Brain Dorsolateral Prefrontal Cortex brain
9 chr1:113392000-113394400 Flanking Active TSS Placenta Placenta
10 chr1:113392200-113393400 Active TSS ES-WA7 Cell Line embryonic stem cell
11 chr1:113392200-113393600 Active TSS Osteobl bone
12 chr1:113392400-113393800 Active TSS Brain Anterior Caudate brain
13 chr1:113392400-113394800 Active TSS Duodenum Mucosa Duodenum
14 chr1:113392400-113397800 Weak transcription iPS-18 Cell Line embryonic stem cell
15 chr1:113392600-113393600 Active TSS Brain Cingulate Gyrus brain
16 chr1:113392600-113394800 Weak transcription H9 Cell Line embryonic stem cell
17 chr1:113392800-113393400 Bivalent/Poised TSS Duodenum Smooth Muscle Duodenum
18 chr1:113392800-113393600 Active TSS Fetal Brain Female brain
19 chr1:113392800-113393800 Enhancers ES-UCSF4 Cell Line embryonic stem cell
20 chr1:113392800-113394400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
21 chr1:113392800-113394600 Weak transcription HMEC breast
22 chr1:113392800-113395000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
23 chr1:113392800-113397200 Weak transcription Pancreas Pancrea
24 chr1:113393000-113393600 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
25 chr1:113393000-113393800 Enhancers H1 Cell Line embryonic stem cell
26 chr1:113393000-113393800 Active TSS Brain Hippocampus Middle brain
27 chr1:113393000-113394200 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
28 chr1:113393000-113394200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
29 chr1:113393000-113394800 Weak transcription HUES6 Cell Line embryonic stem cell
30 chr1:113393000-113395200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
31 chr1:113393000-113397200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
32 chr1:113393000-113397200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
33 chr1:113393000-113397600 Weak transcription A549 lung
34 chr1:113393000-113397800 Weak transcription HUES64 Cell Line embryonic stem cell
35 chr1:113393200-113393400 Bivalent/Poised TSS Brain Germinal Matrix brain
36 chr1:113393200-113393400 Bivalent Enhancer Fetal Muscle Trunk muscle
37 chr1:113393200-113393400 Enhancers Placenta Amnion Placenta Amnion
38 chr1:113393200-113393400 Flanking Active TSS NH-A brain
39 chr1:113393200-113393600 Enhancers iPS-15b Cell Line embryonic stem cell
40 chr1:113393200-113393600 Flanking Active TSS Muscle Satellite Cultured Cells --
41 chr1:113393200-113393600 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
42 chr1:113393200-113393600 Bivalent/Poised TSS Fetal Muscle Leg muscle
43 chr1:113393200-113393600 Bivalent/Poised TSS NHLF lung
44 chr1:113393200-113393800 Bivalent Enhancer Foreskin Fibroblast Primary Cells skin01 Skin
45 chr1:113393200-113393800 Flanking Active TSS NHEK skin
46 chr1:113393200-113394800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
47 chr1:113393200-113397200 Weak transcription Cortex derived primary cultured neurospheres brain

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