Variant report

Variant rs7539588
Chromosome Location chr1:113383407-113383408
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:66 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:113364200-113392000 Weak transcription Right Atrium heart
2 chr1:113369200-113392000 Weak transcription Placenta Amnion Placenta Amnion
3 chr1:113369600-113383600 Weak transcription ES-WA7 Cell Line embryonic stem cell
4 chr1:113382600-113383800 Enhancers Primary Natural Killer cells fromperipheralblood blood
5 chr1:113382600-113384200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
6 chr1:113382600-113384200 Enhancers HUVEC blood vessel
7 chr1:113382600-113384400 Enhancers Dnd41 blood
8 chr1:113382600-113385000 Enhancers Primary hematopoietic stem cells short term culture blood
9 chr1:113382800-113384000 Enhancers HMEC breast
10 chr1:113382800-113384200 Enhancers Primary T helper memory cells from peripheral blood 1 blood
11 chr1:113382800-113384200 Enhancers Primary T regulatory cells fromperipheralblood blood
12 chr1:113382800-113384200 Enhancers NHEK skin
13 chr1:113382800-113384800 Enhancers Primary T helper cells fromperipheralblood blood
14 chr1:113382800-113384800 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
15 chr1:113382800-113384800 Enhancers Hela-S3 cervix
16 chr1:113382800-113385000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
17 chr1:113382800-113385800 Enhancers Primary monocytes fromperipheralblood blood
18 chr1:113383000-113383800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
19 chr1:113383000-113383800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
20 chr1:113383000-113384000 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
21 chr1:113383000-113384000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
22 chr1:113383000-113384000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
23 chr1:113383000-113384000 Enhancers Primary T helper naive cells from peripheral blood blood
24 chr1:113383000-113384000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
25 chr1:113383000-113384000 Enhancers Cortex derived primary cultured neurospheres brain
26 chr1:113383000-113384000 Enhancers Thymus Thymus
27 chr1:113383000-113384200 Bivalent Enhancer Primary T cells fromperipheralblood blood
28 chr1:113383000-113384200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
29 chr1:113383000-113384200 Flanking Active TSS Monocytes-CD14+_RO01746 blood
30 chr1:113383000-113384800 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
31 chr1:113383000-113384800 Enhancers Primary hematopoietic stem cells blood
32 chr1:113383000-113384800 Enhancers Primary T helper cells PMA-I stimulated --
33 chr1:113383000-113385600 Enhancers Primary B cells from cord blood blood
34 chr1:113383000-113386200 Enhancers Primary B cells from peripheral blood blood
35 chr1:113383200-113383600 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
36 chr1:113383200-113383600 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
37 chr1:113383200-113383600 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
38 chr1:113383200-113383600 Enhancers Placenta Placenta
39 chr1:113383200-113383600 Enhancers Fetal Thymus thymus
40 chr1:113383200-113383800 Enhancers Primary T killer naive cells fromperipheralblood blood
41 chr1:113383200-113383800 Enhancers Adipose Nuclei Adipose
42 chr1:113383200-113383800 Enhancers Spleen Spleen
43 chr1:113383200-113384000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
44 chr1:113383200-113384000 Enhancers Primary T helper naive cells fromperipheralblood blood
45 chr1:113383200-113384000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
46 chr1:113383200-113384000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
47 chr1:113383200-113384000 Enhancers Fetal Heart heart
48 chr1:113383200-113384000 Enhancers Sigmoid Colon Sigmoid Colon
49 chr1:113383200-113384200 Enhancers Primary T killer memory cells from peripheral blood blood
50 chr1:113383200-113384200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin

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