Variant report
Variant | rs6691181 |
---|---|
Chromosome Location | chr1:224735122-224735123 |
allele | C/G |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
(count:1 , 50 per page) page:
1
No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr1:224733738..224735319-chr1:225115375..225117831,2 | K562 | blood: |
No data |
No data |
No data |
Variant related genes | Relation type |
---|---|
ENSG00000185842 | Chromatin interaction |
rs_ID | r2[population] |
---|---|
rs10495221 | 1.00[EUR][1000 genomes] |
rs11801211 | 1.00[EUR][1000 genomes] |
rs11802182 | 1.00[EUR][1000 genomes] |
rs11807149 | 1.00[EUR][1000 genomes] |
rs11809688 | 1.00[EUR][1000 genomes] |
rs11809710 | 1.00[EUR][1000 genomes] |
rs11810160 | 1.00[EUR][1000 genomes] |
rs11811935 | 1.00[EUR][1000 genomes] |
rs11812007 | 1.00[EUR][1000 genomes] |
rs13374584 | 1.00[EUR][1000 genomes] |
rs1499284 | 1.00[EUR][1000 genomes] |
rs16846494 | 1.00[EUR][1000 genomes] |
rs16847675 | 1.00[EUR][1000 genomes] |
rs16847784 | 1.00[EUR][1000 genomes] |
rs16847858 | 1.00[EUR][1000 genomes] |
rs16847870 | 1.00[EUR][1000 genomes] |
rs16847871 | 1.00[EUR][1000 genomes] |
rs16849419 | 1.00[EUR][1000 genomes] |
rs16849547 | 1.00[EUR][1000 genomes] |
rs1857042 | 1.00[EUR][1000 genomes] |
rs2068945 | 1.00[EUR][1000 genomes] |
rs2794805 | 1.00[EUR][1000 genomes] |
rs4653586 | 1.00[EUR][1000 genomes] |
rs55712053 | 1.00[EUR][1000 genomes] |
rs57719044 | 1.00[EUR][1000 genomes] |
rs57967341 | 1.00[EUR][1000 genomes] |
rs58304668 | 1.00[EUR][1000 genomes] |
rs58649883 | 1.00[EUR][1000 genomes] |
rs58788859 | 1.00[EUR][1000 genomes] |
rs58814229 | 0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs59034185 | 1.00[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs59577766 | 1.00[EUR][1000 genomes] |
rs59710928 | 1.00[EUR][1000 genomes] |
rs60349703 | 1.00[EUR][1000 genomes] |
rs60627429 | 1.00[EUR][1000 genomes] |
rs60715845 | 1.00[EUR][1000 genomes] |
rs60831135 | 1.00[EUR][1000 genomes] |
rs61000820 | 1.00[EUR][1000 genomes] |
rs61155217 | 1.00[EUR][1000 genomes] |
rs61278437 | 1.00[EUR][1000 genomes] |
rs61509136 | 0.87[AMR][1000 genomes] |
rs6658918 | 1.00[EUR][1000 genomes] |
rs6659109 | 1.00[EUR][1000 genomes] |
rs6674133 | 1.00[EUR][1000 genomes] |
rs6681611 | 1.00[EUR][1000 genomes] |
rs6687424 | 1.00[EUR][1000 genomes] |
rs6689059 | 0.87[AMR][1000 genomes] |
rs6702649 | 1.00[EUR][1000 genomes] |
rs6702972 | 1.00[EUR][1000 genomes] |
rs73121865 | 1.00[EUR][1000 genomes] |
rs73123788 | 1.00[EUR][1000 genomes] |
rs73123791 | 1.00[EUR][1000 genomes] |
rs73125526 | 1.00[EUR][1000 genomes] |
rs73125529 | 1.00[EUR][1000 genomes] |
rs73133326 | 0.87[AMR][1000 genomes] |
rs73133345 | 0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs74146264 | 1.00[EUR][1000 genomes] |
rs74146372 | 1.00[EUR][1000 genomes] |
rs74146374 | 1.00[EUR][1000 genomes] |
rs74146377 | 1.00[EUR][1000 genomes] |
rs74146381 | 1.00[EUR][1000 genomes] |
rs74146382 | 1.00[EUR][1000 genomes] |
rs74146383 | 1.00[EUR][1000 genomes] |
rs74146384 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs74146386 | 1.00[EUR][1000 genomes] |
rs74146389 | 0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs7512165 | 1.00[EUR][1000 genomes] |
rs9661679 | 0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs9661938 | 1.00[EUR][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv8868 | chr1:224383023-224752531 | Enhancers Weak transcription Strong transcription Flanking Active TSS Bivalent/Poised TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site | 30 gene(s) | inside rSNPs | diseases |
2 | nsv1014717 | chr1:224551939-224885543 | Flanking Active TSS Enhancers Weak transcription Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site | 20 gene(s) | inside rSNPs | diseases |
3 | nsv535311 | chr1:224551939-224885543 | Strong transcription Genic enhancers Weak transcription Enhancers Active TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site | 20 gene(s) | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr1:224731600-224746400 | Weak transcription | Psoas Muscle | Psoas |
2 | chr1:224733400-224735200 | Enhancers | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
3 | chr1:224734000-224735200 | Enhancers | Breast Myoepithelial Primary Cells | Breast |
4 | chr1:224734600-224735200 | Enhancers | Foreskin Melanocyte Primary Cells skin03 | Skin |
5 | chr1:224734800-224741200 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |