Variant report

Variant rs6694288
Chromosome Location chr1:225884588-225884589
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:54 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:225865600-225888000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
2 chr1:225875200-225898600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
3 chr1:225878600-225885400 Enhancers Left Ventricle heart
4 chr1:225879400-225887000 Weak transcription NHLF lung
5 chr1:225880800-225887800 Weak transcription Spleen Spleen
6 chr1:225881000-225887200 Weak transcription Right Ventricle heart
7 chr1:225881800-225885600 Enhancers Fetal Stomach stomach
8 chr1:225882000-225884600 Enhancers Pancreas Pancrea
9 chr1:225882000-225885400 Enhancers Skeletal Muscle Male skeletal muscle
10 chr1:225882000-225885600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
11 chr1:225882200-225887000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
12 chr1:225882200-225889600 Enhancers Fetal Muscle Leg muscle
13 chr1:225882400-225887000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
14 chr1:225882400-225887000 Weak transcription Hela-S3 cervix
15 chr1:225882400-225887200 Weak transcription Placenta Amnion Placenta Amnion
16 chr1:225882400-225887200 Weak transcription Rectal Mucosa Donor 31 rectum
17 chr1:225882400-225908000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
18 chr1:225882800-225887000 Weak transcription Stomach Mucosa stomach
19 chr1:225883000-225885200 Weak transcription Lung lung
20 chr1:225883000-225887000 Weak transcription Fetal Adrenal Gland Adrenal Gland
21 chr1:225883000-225887000 Weak transcription HUVEC blood vessel
22 chr1:225883000-225887200 Weak transcription Sigmoid Colon Sigmoid Colon
23 chr1:225883400-225885400 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
24 chr1:225883400-225885600 Enhancers Skeletal Muscle Female skeletal muscle
25 chr1:225883400-225887200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
26 chr1:225883600-225885600 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
27 chr1:225883600-225885600 Enhancers Fetal Lung lung
28 chr1:225883600-225887000 Weak transcription HMEC breast
29 chr1:225883600-225887000 Weak transcription NHEK skin
30 chr1:225883600-225887200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
31 chr1:225883800-225885200 Enhancers HSMMtube muscle
32 chr1:225883800-225885800 Enhancers Fetal Muscle Trunk muscle
33 chr1:225884000-225885000 Weak transcription Muscle Satellite Cultured Cells --
34 chr1:225884000-225885000 Weak transcription Rectal Smooth Muscle rectum
35 chr1:225884000-225885200 Weak transcription Right Atrium heart
36 chr1:225884000-225885400 Enhancers Placenta Placenta
37 chr1:225884000-225887000 Weak transcription Breast Myoepithelial Primary Cells Breast
38 chr1:225884000-225887000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
39 chr1:225884000-225887000 Weak transcription Colon Smooth Muscle Colon
40 chr1:225884000-225887000 Weak transcription Fetal Heart heart
41 chr1:225884000-225887000 Weak transcription Stomach Smooth Muscle stomach
42 chr1:225884000-225887000 Weak transcription NHDF-Ad bronchial
43 chr1:225884000-225887200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
44 chr1:225884000-225887800 Weak transcription HUES64 Cell Line embryonic stem cell
45 chr1:225884200-225885200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
46 chr1:225884200-225885200 Weak transcription A549 lung
47 chr1:225884200-225886600 Weak transcription Aorta Aorta
48 chr1:225884200-225886800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
49 chr1:225884200-225887200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
50 chr1:225884200-225887200 Weak transcription Duodenum Smooth Muscle Duodenum

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