The 2.0 version of rSNPBase

Variant report

Variant rs6700258
Chromosome Location chr1:212908715-212908716
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:88 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:212895200-212922800 Weak transcription Left Ventricle heart
2 chr1:212895400-212912000 Weak transcription Primary T cells fromperipheralblood blood
3 chr1:212895400-212914600 Weak transcription Spleen Spleen
4 chr1:212895400-212916600 Weak transcription Primary T helper cells fromperipheralblood blood
5 chr1:212895400-212917400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
6 chr1:212895400-212923200 Weak transcription Brain Cingulate Gyrus brain
7 chr1:212895400-212923400 Weak transcription Fetal Muscle Leg muscle
8 chr1:212895400-212923400 Weak transcription Skeletal Muscle Female skeletal muscle
9 chr1:212895400-212926400 Weak transcription Esophagus oesophagus
10 chr1:212895400-212964600 Weak transcription Pancreas Pancrea
11 chr1:212895600-212923000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
12 chr1:212895600-212923400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
13 chr1:212895600-212964600 Weak transcription Gastric stomach
14 chr1:212895800-212911200 Weak transcription Primary T helper cells PMA-I stimulated --
15 chr1:212895800-212917400 Weak transcription NHLF lung
16 chr1:212895800-212925600 Weak transcription Small Intestine intestine
17 chr1:212895800-212926200 Weak transcription Hela-S3 cervix
18 chr1:212896000-212911800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
19 chr1:212896000-212917000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
20 chr1:212896200-212912200 Weak transcription Primary hematopoietic stem cells blood
21 chr1:212896400-212917000 Weak transcription Primary T regulatory cells fromperipheralblood blood
22 chr1:212896800-212909000 Weak transcription Primary B cells from cord blood blood
23 chr1:212897400-212914600 Weak transcription ES-I3 Cell Line embryonic stem cell
24 chr1:212897800-212911600 Weak transcription Brain Germinal Matrix brain
25 chr1:212898400-212909600 Weak transcription Brain Inferior Temporal Lobe brain
26 chr1:212898600-212923200 Weak transcription Duodenum Smooth Muscle Duodenum
27 chr1:212898800-212911800 Weak transcription Primary T helper naive cells fromperipheralblood blood
28 chr1:212898800-212934000 Weak transcription Fetal Muscle Trunk muscle
29 chr1:212899200-212914600 Weak transcription Ovary ovary
30 chr1:212899800-212926400 Weak transcription Fetal Adrenal Gland Adrenal Gland
31 chr1:212900000-212910800 Weak transcription Brain Substantia Nigra brain
32 chr1:212900000-212911000 Weak transcription HUES64 Cell Line embryonic stem cell
33 chr1:212900400-212914600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
34 chr1:212900400-212914600 Weak transcription HUES6 Cell Line embryonic stem cell
35 chr1:212900400-212917400 Weak transcription Fetal Stomach stomach
36 chr1:212900400-212923200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
37 chr1:212900400-212927600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
38 chr1:212900400-212932600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
39 chr1:212900400-212936200 Weak transcription Aorta Aorta
40 chr1:212900600-212911800 Weak transcription Psoas Muscle Psoas
41 chr1:212901000-212911400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
42 chr1:212901400-212954000 Weak transcription NH-A brain
43 chr1:212901600-212911800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
44 chr1:212901600-212914400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
45 chr1:212901600-212923000 Weak transcription HSMM muscle
46 chr1:212901800-212911400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
47 chr1:212902000-212909600 Weak transcription Primary neutrophils fromperipheralblood blood
48 chr1:212902200-212911800 Weak transcription Primary hematopoietic stem cells short term culture blood
49 chr1:212902200-212912600 Weak transcription Brain Angular Gyrus brain
50 chr1:212902200-212941800 Weak transcription Fetal Kidney kidney

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Last update: Aug 31, 2015