The 2.0 version of rSNPBase

Variant report

Variant rs74138622
Chromosome Location chr1:212902005-212902006
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:82 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:212895200-212922800 Weak transcription Left Ventricle heart
2 chr1:212895400-212902400 Weak transcription Primary T cells from cord blood blood
3 chr1:212895400-212906000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
4 chr1:212895400-212906600 Weak transcription Breast Myoepithelial Primary Cells Breast
5 chr1:212895400-212912000 Weak transcription Primary T cells fromperipheralblood blood
6 chr1:212895400-212914600 Weak transcription Spleen Spleen
7 chr1:212895400-212916600 Weak transcription Primary T helper cells fromperipheralblood blood
8 chr1:212895400-212917400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
9 chr1:212895400-212923200 Weak transcription Brain Cingulate Gyrus brain
10 chr1:212895400-212923400 Weak transcription Fetal Muscle Leg muscle
11 chr1:212895400-212923400 Weak transcription Skeletal Muscle Female skeletal muscle
12 chr1:212895400-212926400 Weak transcription Esophagus oesophagus
13 chr1:212895400-212964600 Weak transcription Pancreas Pancrea
14 chr1:212895600-212904000 Weak transcription GM12878-XiMat blood
15 chr1:212895600-212905600 Weak transcription Lung lung
16 chr1:212895600-212923000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
17 chr1:212895600-212923400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
18 chr1:212895600-212964600 Weak transcription Gastric stomach
19 chr1:212895800-212911200 Weak transcription Primary T helper cells PMA-I stimulated --
20 chr1:212895800-212917400 Weak transcription NHLF lung
21 chr1:212895800-212925600 Weak transcription Small Intestine intestine
22 chr1:212895800-212926200 Weak transcription Hela-S3 cervix
23 chr1:212896000-212911800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
24 chr1:212896000-212917000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
25 chr1:212896200-212902200 Weak transcription Duodenum Mucosa Duodenum
26 chr1:212896200-212906000 Weak transcription Primary monocytes fromperipheralblood blood
27 chr1:212896200-212908200 Weak transcription K562 blood
28 chr1:212896200-212912200 Weak transcription Primary hematopoietic stem cells blood
29 chr1:212896400-212906000 Weak transcription Monocytes-CD14+_RO01746 blood
30 chr1:212896400-212917000 Weak transcription Primary T regulatory cells fromperipheralblood blood
31 chr1:212896800-212909000 Weak transcription Primary B cells from cord blood blood
32 chr1:212897400-212914600 Weak transcription ES-I3 Cell Line embryonic stem cell
33 chr1:212897800-212911600 Weak transcription Brain Germinal Matrix brain
34 chr1:212898400-212909600 Weak transcription Brain Inferior Temporal Lobe brain
35 chr1:212898600-212903800 Weak transcription Adipose Nuclei Adipose
36 chr1:212898600-212923200 Weak transcription Duodenum Smooth Muscle Duodenum
37 chr1:212898800-212902400 Weak transcription Fetal Lung lung
38 chr1:212898800-212911800 Weak transcription Primary T helper naive cells fromperipheralblood blood
39 chr1:212898800-212934000 Weak transcription Fetal Muscle Trunk muscle
40 chr1:212899200-212914600 Weak transcription Ovary ovary
41 chr1:212899600-212904000 Weak transcription Fetal Brain Female brain
42 chr1:212899800-212926400 Weak transcription Fetal Adrenal Gland Adrenal Gland
43 chr1:212900000-212902400 Weak transcription A549 lung
44 chr1:212900000-212910800 Weak transcription Brain Substantia Nigra brain
45 chr1:212900000-212911000 Weak transcription HUES64 Cell Line embryonic stem cell
46 chr1:212900200-212903600 Weak transcription H9 Cell Line embryonic stem cell
47 chr1:212900200-212907400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
48 chr1:212900400-212902800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
49 chr1:212900400-212902800 Enhancers Primary T helper 17 cells PMA-I stimulated --
50 chr1:212900400-212906000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived

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Last update: Aug 31, 2015