The 2.0 version of rSNPBase

Variant report

Variant rs6702301
Chromosome Location chr1:209923154-209923155
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:209919800-209923400 Enhancers Fetal Intestine Small intestine
2 chr1:209921400-209923400 Enhancers Primary T killer naive cells fromperipheralblood blood
3 chr1:209921400-209923400 Enhancers Primary mononuclear cells fromperipheralblood Blood
4 chr1:209921400-209925200 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
5 chr1:209921400-209929800 Weak transcription Right Atrium heart
6 chr1:209921400-209930000 Weak transcription Right Ventricle heart
7 chr1:209921600-209923200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
8 chr1:209921600-209924800 Enhancers Primary T helper naive cells fromperipheralblood blood
9 chr1:209921600-209926600 Enhancers Primary T cells fromperipheralblood blood
10 chr1:209921600-209926600 Enhancers Primary Natural Killer cells fromperipheralblood blood
11 chr1:209921600-209926800 Enhancers Primary monocytes fromperipheralblood blood
12 chr1:209921800-209924200 Enhancers Primary T helper 17 cells PMA-I stimulated --
13 chr1:209921800-209924200 Weak transcription A549 lung
14 chr1:209921800-209924600 Enhancers Primary T cells from cord blood blood
15 chr1:209921800-209924600 Enhancers Primary T regulatory cells fromperipheralblood blood
16 chr1:209921800-209924800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
17 chr1:209921800-209924800 Enhancers Primary T helper naive cells from peripheral blood blood
18 chr1:209921800-209924800 Enhancers Primary T helper cells fromperipheralblood blood
19 chr1:209921800-209925000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
20 chr1:209921800-209925400 Weak transcription Sigmoid Colon Sigmoid Colon
21 chr1:209921800-209925400 Weak transcription K562 blood
22 chr1:209921800-209929600 Weak transcription Duodenum Smooth Muscle Duodenum
23 chr1:209921800-209930000 Weak transcription Stomach Mucosa stomach
24 chr1:209921800-209940800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
25 chr1:209921800-209942000 Weak transcription Pancreas Pancrea
26 chr1:209922000-209923800 Enhancers Monocytes-CD14+_RO01746 blood
27 chr1:209922000-209924200 Weak transcription Duodenum Mucosa Duodenum
28 chr1:209922000-209924800 Enhancers Primary T killer memory cells from peripheral blood blood
29 chr1:209922000-209928800 Enhancers Primary neutrophils fromperipheralblood blood
30 chr1:209922200-209923800 Weak transcription Primary B cells from peripheral blood blood
31 chr1:209922200-209924200 Weak transcription Primary hematopoietic stem cells blood
32 chr1:209922200-209924800 Weak transcription Rectal Mucosa Donor 29 rectum
33 chr1:209922200-209925000 Weak transcription Fetal Intestine Large intestine
34 chr1:209922400-209924400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
35 chr1:209922400-209924800 Enhancers Primary T helper cells PMA-I stimulated --
36 chr1:209922400-209924800 Weak transcription Fetal Thymus thymus
37 chr1:209922400-209924800 Weak transcription Thymus Thymus
38 chr1:209922400-209931200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
39 chr1:209922600-209923800 Weak transcription Primary B cells from cord blood blood
40 chr1:209922800-209923200 Flanking Active TSS GM12878-XiMat blood
41 chr1:209922800-209924200 Enhancers Liver Liver
42 chr1:209923000-209923200 Enhancers Primary hematopoietic stem cells short term culture blood

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Last update: Aug 31, 2015