Variant report

Variant rs9430016
Chromosome Location chr1:209916884-209916885
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:209907600-209920800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr1:209914000-209917200 Enhancers Liver Liver
3 chr1:209914600-209917000 Enhancers Ovary ovary
4 chr1:209914800-209917800 Enhancers Pancreas Pancrea
5 chr1:209914800-209917800 Enhancers Right Atrium heart
6 chr1:209915200-209917200 Enhancers Brain Dorsolateral Prefrontal Cortex brain
7 chr1:209915200-209920800 Weak transcription Primary T helper naive cells fromperipheralblood blood
8 chr1:209915200-209921000 Weak transcription Spleen Spleen
9 chr1:209915400-209917200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
10 chr1:209915400-209917600 Weak transcription Lung lung
11 chr1:209915400-209918600 Enhancers Brain Angular Gyrus brain
12 chr1:209915400-209920400 Weak transcription Skeletal Muscle Female skeletal muscle
13 chr1:209915400-209920800 Weak transcription Esophagus oesophagus
14 chr1:209915600-209920600 Weak transcription Duodenum Smooth Muscle Duodenum
15 chr1:209915800-209917000 Enhancers HMEC breast
16 chr1:209915800-209917200 Enhancers Muscle Satellite Cultured Cells --
17 chr1:209915800-209917200 Enhancers Right Ventricle heart
18 chr1:209915800-209917200 Enhancers NH-A brain
19 chr1:209915800-209919800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
20 chr1:209916000-209917000 Enhancers Brain Anterior Caudate brain
21 chr1:209916000-209920800 Weak transcription Rectal Mucosa Donor 29 rectum
22 chr1:209916000-209920800 Weak transcription GM12878-XiMat blood
23 chr1:209916200-209917200 Enhancers NHLF lung
24 chr1:209916200-209917400 Enhancers Brain Hippocampus Middle brain
25 chr1:209916200-209917800 Enhancers Fetal Heart heart
26 chr1:209916200-209919800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
27 chr1:209916200-209920200 Weak transcription Adipose Nuclei Adipose
28 chr1:209916400-209917200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
29 chr1:209916400-209917200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
30 chr1:209916400-209917200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
31 chr1:209916400-209917200 Enhancers Osteobl bone
32 chr1:209916400-209917400 Enhancers Brain Cingulate Gyrus brain
33 chr1:209916400-209918400 Weak transcription Rectal Smooth Muscle rectum
34 chr1:209916400-209918800 Enhancers Brain Inferior Temporal Lobe brain
35 chr1:209916600-209917000 Enhancers Stomach Smooth Muscle stomach
36 chr1:209916600-209917200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
37 chr1:209916600-209918800 Enhancers Brain Substantia Nigra brain
38 chr1:209916600-209919800 Weak transcription Fetal Intestine Small intestine
39 chr1:209916800-209917000 Enhancers Colon Smooth Muscle Colon
40 chr1:209916800-209917800 Weak transcription Fetal Lung lung
41 chr1:209916800-209919400 Weak transcription Fetal Intestine Large intestine
42 chr1:209916800-209920400 Weak transcription Gastric stomach
43 chr1:209916800-209920800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
44 chr1:209916800-209920800 Weak transcription Duodenum Mucosa Duodenum
45 chr1:209916800-209920800 Weak transcription Left Ventricle heart

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