The 2.0 version of rSNPBase

Variant report

Variant rs6708
Chromosome Location chr2:33789534-33789535
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:58 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:33740800-33790000 Weak transcription Primary T helper cells PMA-I stimulated --
2 chr2:33748000-33790400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
3 chr2:33757200-33809800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
4 chr2:33762200-33809800 Weak transcription Aorta Aorta
5 chr2:33766800-33809800 Weak transcription Rectal Smooth Muscle rectum
6 chr2:33772600-33791000 Strong transcription GM12878-XiMat blood
7 chr2:33772600-33793400 Weak transcription Rectal Mucosa Donor 29 rectum
8 chr2:33774000-33790200 Weak transcription Rectal Mucosa Donor 31 rectum
9 chr2:33776000-33809800 Weak transcription Pancreas Pancrea
10 chr2:33776800-33790600 Weak transcription Duodenum Mucosa Duodenum
11 chr2:33778400-33796800 Weak transcription Liver Liver
12 chr2:33778400-33806400 Weak transcription Primary T cells from cord blood blood
13 chr2:33778400-33807600 Weak transcription NH-A brain
14 chr2:33778400-33808600 Weak transcription Duodenum Smooth Muscle Duodenum
15 chr2:33780000-33808600 Weak transcription Primary T helper cells fromperipheralblood blood
16 chr2:33780400-33808600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
17 chr2:33780400-33809200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
18 chr2:33780600-33790800 Strong transcription Primary B cells from peripheral blood blood
19 chr2:33780600-33791600 Weak transcription Primary hematopoietic stem cells blood
20 chr2:33780800-33797400 Weak transcription Brain Angular Gyrus brain
21 chr2:33781200-33792800 Weak transcription HUVEC blood vessel
22 chr2:33781200-33809800 Weak transcription Gastric stomach
23 chr2:33781600-33790400 Weak transcription Primary T regulatory cells fromperipheralblood blood
24 chr2:33781800-33792600 Weak transcription Breast Myoepithelial Primary Cells Breast
25 chr2:33782000-33807000 Weak transcription Primary T cells fromperipheralblood blood
26 chr2:33782200-33791800 Weak transcription Sigmoid Colon Sigmoid Colon
27 chr2:33784000-33792800 Weak transcription Stomach Smooth Muscle stomach
28 chr2:33784000-33809800 Weak transcription Right Ventricle heart
29 chr2:33784000-33810000 Weak transcription Fetal Intestine Small intestine
30 chr2:33784200-33792600 Weak transcription Spleen Spleen
31 chr2:33784200-33809800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
32 chr2:33784400-33792200 Weak transcription Fetal Adrenal Gland Adrenal Gland
33 chr2:33784400-33796000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
34 chr2:33784600-33808400 Weak transcription Fetal Muscle Leg muscle
35 chr2:33784800-33791600 Weak transcription Esophagus oesophagus
36 chr2:33785600-33791800 Weak transcription Fetal Heart heart
37 chr2:33785800-33791000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
38 chr2:33785800-33794200 Weak transcription NHDF-Ad bronchial
39 chr2:33786000-33790200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
40 chr2:33786000-33808600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
41 chr2:33786200-33794800 Weak transcription Primary T killer naive cells fromperipheralblood blood
42 chr2:33786400-33789600 Strong transcription Skeletal Muscle Male skeletal muscle
43 chr2:33786400-33798400 Weak transcription Brain Inferior Temporal Lobe brain
44 chr2:33786400-33808800 Weak transcription Fetal Muscle Trunk muscle
45 chr2:33786600-33791000 Strong transcription Primary B cells from cord blood blood
46 chr2:33787200-33790800 Strong transcription Adipose Nuclei Adipose
47 chr2:33787600-33789600 Strong transcription Brain Hippocampus Middle brain
48 chr2:33787800-33791400 Strong transcription Left Ventricle heart
49 chr2:33788200-33802000 Weak transcription Brain Cingulate Gyrus brain
50 chr2:33788200-33805400 Weak transcription Placenta Placenta

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Last update: Aug 31, 2015