The 2.0 version of rSNPBase

Variant report

Variant rs6711217
Chromosome Location chr2:54245029-54245030
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:49 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:54208400-54248200 Weak transcription Lung lung
2 chr2:54213600-54249800 Weak transcription Left Ventricle heart
3 chr2:54217000-54248200 Weak transcription Gastric stomach
4 chr2:54229200-54245800 Weak transcription Breast Myoepithelial Primary Cells Breast
5 chr2:54235400-54246400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
6 chr2:54238200-54246800 Weak transcription Spleen Spleen
7 chr2:54240000-54248200 Weak transcription Psoas Muscle Psoas
8 chr2:54240200-54248000 Weak transcription Adipose Nuclei Adipose
9 chr2:54240200-54257000 Weak transcription Skeletal Muscle Female skeletal muscle
10 chr2:54240600-54248200 Weak transcription Skeletal Muscle Male skeletal muscle
11 chr2:54241400-54245600 Weak transcription Fetal Muscle Trunk muscle
12 chr2:54241400-54247400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
13 chr2:54241400-54248200 Weak transcription Thymus Thymus
14 chr2:54241800-54247600 Weak transcription Primary B cells from cord blood blood
15 chr2:54242200-54247600 Weak transcription Primary T regulatory cells fromperipheralblood blood
16 chr2:54242200-54251800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
17 chr2:54242400-54247800 Weak transcription Primary T helper cells PMA-I stimulated --
18 chr2:54242800-54247200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
19 chr2:54242800-54247200 Weak transcription Fetal Intestine Small intestine
20 chr2:54243200-54247800 Weak transcription Placenta Placenta
21 chr2:54243400-54247200 Weak transcription Primary T helper naive cells fromperipheralblood blood
22 chr2:54243400-54247200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
23 chr2:54243400-54247400 Weak transcription Primary T helper cells fromperipheralblood blood
24 chr2:54243400-54248200 Weak transcription Pancreas Pancrea
25 chr2:54243400-54254200 Weak transcription Fetal Stomach stomach
26 chr2:54243600-54246200 Weak transcription Brain Angular Gyrus brain
27 chr2:54243600-54247000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
28 chr2:54243600-54247600 Weak transcription Fetal Muscle Leg muscle
29 chr2:54243800-54246000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
30 chr2:54243800-54247200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
31 chr2:54243800-54247200 Weak transcription Liver Liver
32 chr2:54243800-54247600 Weak transcription Brain Inferior Temporal Lobe brain
33 chr2:54243800-54247600 Weak transcription Duodenum Smooth Muscle Duodenum
34 chr2:54243800-54247600 Weak transcription Stomach Smooth Muscle stomach
35 chr2:54243800-54248200 Weak transcription Fetal Lung lung
36 chr2:54243800-54248400 Weak transcription Brain Substantia Nigra brain
37 chr2:54243800-54249200 Weak transcription HSMMtube muscle
38 chr2:54243800-54255400 Weak transcription HepG2 liver
39 chr2:54243800-54268000 Weak transcription Osteobl bone
40 chr2:54243800-54268400 Weak transcription Brain Cingulate Gyrus brain
41 chr2:54243800-54269800 Weak transcription Brain Anterior Caudate brain
42 chr2:54244000-54246200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
43 chr2:54244000-54246200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
44 chr2:54244000-54248200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
45 chr2:54244400-54246200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
46 chr2:54244400-54246400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
47 chr2:54244400-54247400 Weak transcription NHDF-Ad bronchial
48 chr2:54244400-54254200 Weak transcription Ovary ovary
49 chr2:54244800-54245200 Strong transcription Primary T cells from cord blood blood

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Last update: Aug 31, 2015