The 2.0 version of rSNPBase

Variant report

Variant rs72904908
Chromosome Location chr2:54217148-54217149
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:50 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:54199000-54221600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
2 chr2:54199000-54228800 Weak transcription Aorta Aorta
3 chr2:54200400-54218400 Weak transcription Primary T killer memory cells from peripheral blood blood
4 chr2:54204400-54226400 Weak transcription Pancreas Pancrea
5 chr2:54205200-54222600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
6 chr2:54206000-54221600 Weak transcription Thymus Thymus
7 chr2:54206000-54226400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
8 chr2:54206400-54220000 Weak transcription Primary T regulatory cells fromperipheralblood blood
9 chr2:54208200-54221400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
10 chr2:54208400-54248200 Weak transcription Lung lung
11 chr2:54208600-54219000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
12 chr2:54208600-54220200 Weak transcription Primary hematopoietic stem cells short term culture blood
13 chr2:54209000-54221400 Weak transcription Fetal Thymus thymus
14 chr2:54209000-54221600 Weak transcription Dnd41 blood
15 chr2:54211200-54219000 Weak transcription Primary T cells fromperipheralblood blood
16 chr2:54211200-54220600 Weak transcription Primary hematopoietic stem cells blood
17 chr2:54211400-54217800 Weak transcription Fetal Muscle Trunk muscle
18 chr2:54211400-54220200 Weak transcription Primary B cells from cord blood blood
19 chr2:54211400-54243000 Weak transcription Fetal Muscle Leg muscle
20 chr2:54213600-54249800 Weak transcription Left Ventricle heart
21 chr2:54213800-54217200 Enhancers Skeletal Muscle Male skeletal muscle
22 chr2:54214800-54217200 Weak transcription Fetal Stomach stomach
23 chr2:54214800-54219000 Weak transcription Primary T helper naive cells from peripheral blood blood
24 chr2:54215000-54219000 Weak transcription Primary T helper cells PMA-I stimulated --
25 chr2:54215000-54219200 Weak transcription Primary T helper naive cells fromperipheralblood blood
26 chr2:54215000-54220600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
27 chr2:54215000-54226000 Weak transcription Duodenum Smooth Muscle Duodenum
28 chr2:54215000-54226000 Weak transcription HSMMtube muscle
29 chr2:54215000-54242800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
30 chr2:54215200-54219200 Weak transcription Primary T helper cells fromperipheralblood blood
31 chr2:54215200-54219400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
32 chr2:54215200-54220000 Weak transcription Primary T killer naive cells fromperipheralblood blood
33 chr2:54215200-54220000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
34 chr2:54215200-54220400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
35 chr2:54215200-54220400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
36 chr2:54215200-54225200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
37 chr2:54215400-54220200 Weak transcription Primary B cells from peripheral blood blood
38 chr2:54215400-54220200 Weak transcription Muscle Satellite Cultured Cells --
39 chr2:54215800-54217200 Enhancers HepG2 liver
40 chr2:54216400-54242000 Weak transcription Fetal Intestine Small intestine
41 chr2:54216600-54226400 Weak transcription Ovary ovary
42 chr2:54217000-54217200 Weak transcription Brain Hippocampus Middle brain
43 chr2:54217000-54219000 Weak transcription Primary T cells from cord blood blood
44 chr2:54217000-54225600 Weak transcription Right Atrium heart
45 chr2:54217000-54225800 Weak transcription Psoas Muscle Psoas
46 chr2:54217000-54226000 Weak transcription Adipose Nuclei Adipose
47 chr2:54217000-54226000 Weak transcription Skeletal Muscle Female skeletal muscle
48 chr2:54217000-54236600 Weak transcription Brain Angular Gyrus brain
49 chr2:54217000-54236800 Weak transcription Brain Anterior Caudate brain
50 chr2:54217000-54248200 Weak transcription Gastric stomach

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Last update: Aug 31, 2015