The 2.0 version of rSNPBase

Variant report

Variant rs7564912
Chromosome Location chr2:54222185-54222186
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:48 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:54199000-54228800 Weak transcription Aorta Aorta
2 chr2:54204400-54226400 Weak transcription Pancreas Pancrea
3 chr2:54205200-54222600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr2:54206000-54226400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
5 chr2:54208400-54248200 Weak transcription Lung lung
6 chr2:54211400-54243000 Weak transcription Fetal Muscle Leg muscle
7 chr2:54213600-54249800 Weak transcription Left Ventricle heart
8 chr2:54215000-54226000 Weak transcription Duodenum Smooth Muscle Duodenum
9 chr2:54215000-54226000 Weak transcription HSMMtube muscle
10 chr2:54215000-54242800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr2:54215200-54225200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
12 chr2:54216400-54242000 Weak transcription Fetal Intestine Small intestine
13 chr2:54216600-54226400 Weak transcription Ovary ovary
14 chr2:54217000-54225600 Weak transcription Right Atrium heart
15 chr2:54217000-54225800 Weak transcription Psoas Muscle Psoas
16 chr2:54217000-54226000 Weak transcription Adipose Nuclei Adipose
17 chr2:54217000-54226000 Weak transcription Skeletal Muscle Female skeletal muscle
18 chr2:54217000-54236600 Weak transcription Brain Angular Gyrus brain
19 chr2:54217000-54236800 Weak transcription Brain Anterior Caudate brain
20 chr2:54217000-54248200 Weak transcription Gastric stomach
21 chr2:54217200-54233800 Weak transcription HepG2 liver
22 chr2:54217200-54239600 Weak transcription Skeletal Muscle Male skeletal muscle
23 chr2:54219200-54226800 Enhancers Primary T helper naive cells fromperipheralblood blood
24 chr2:54220200-54223800 Enhancers Primary B cells from peripheral blood blood
25 chr2:54221600-54222200 Enhancers Primary neutrophils fromperipheralblood blood
26 chr2:54221600-54222200 Enhancers Dnd41 blood
27 chr2:54221600-54222400 Flanking Active TSS Primary B cells from cord blood blood
28 chr2:54221600-54222400 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
29 chr2:54221600-54222400 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
30 chr2:54221600-54222400 Flanking Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
31 chr2:54221600-54222400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
32 chr2:54221600-54222400 Enhancers GM12878-XiMat blood
33 chr2:54221600-54222400 Flanking Active TSS Monocytes-CD14+_RO01746 blood
34 chr2:54221600-54222600 Flanking Active TSS Primary T cells from cord blood blood
35 chr2:54221600-54222600 Flanking Active TSS Primary hematopoietic stem cells blood
36 chr2:54221600-54222600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
37 chr2:54221800-54222200 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
38 chr2:54221800-54222400 Flanking Active TSS Primary T helper cells PMA-I stimulated --
39 chr2:54221800-54222600 Active TSS Primary T cells fromperipheralblood blood
40 chr2:54221800-54222600 Active TSS Primary Natural Killer cells fromperipheralblood blood
41 chr2:54222000-54222200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
42 chr2:54222000-54222200 Active TSS Primary T helper naive cells from peripheral blood blood
43 chr2:54222000-54222200 Enhancers Primary T killer memory cells from peripheral blood blood
44 chr2:54222000-54222400 Active TSS Primary T helper cells fromperipheralblood blood
45 chr2:54222000-54222400 Active TSS Primary T killer naive cells fromperipheralblood blood
46 chr2:54222000-54222400 Flanking Active TSS Fetal Thymus thymus
47 chr2:54222000-54222400 Active TSS Thymus Thymus
48 chr2:54222000-54223600 Enhancers Primary T helper memory cells from peripheral blood 1 blood

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Last update: Aug 31, 2015