The 2.0 version of rSNPBase

Variant report

Variant rs6717269
Chromosome Location chr2:231407519-231407520
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:70 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:231371000-231409800 Weak transcription Skeletal Muscle Male skeletal muscle
2 chr2:231390600-231408200 Weak transcription Esophagus oesophagus
3 chr2:231390800-231409200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
4 chr2:231401000-231430200 Weak transcription Pancreas Pancrea
5 chr2:231401400-231408600 Weak transcription Colon Smooth Muscle Colon
6 chr2:231401800-231409200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
7 chr2:231403200-231410200 Strong transcription Primary B cells from cord blood blood
8 chr2:231403600-231407800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
9 chr2:231403600-231408600 Weak transcription Fetal Adrenal Gland Adrenal Gland
10 chr2:231403800-231408800 Strong transcription Primary T cells fromperipheralblood blood
11 chr2:231403800-231409600 Strong transcription Primary neutrophils fromperipheralblood blood
12 chr2:231404000-231408400 Strong transcription Primary T helper 17 cells PMA-I stimulated --
13 chr2:231404000-231409000 Strong transcription Primary T cells from cord blood blood
14 chr2:231404000-231409000 Strong transcription Monocytes-CD14+_RO01746 blood
15 chr2:231404000-231417200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
16 chr2:231404200-231409000 Strong transcription Adipose Nuclei Adipose
17 chr2:231404200-231409200 Strong transcription Primary monocytes fromperipheralblood blood
18 chr2:231404200-231409400 Strong transcription Primary T helper naive cells fromperipheralblood blood
19 chr2:231404200-231409600 Weak transcription Rectal Mucosa Donor 31 rectum
20 chr2:231404200-231410200 Strong transcription Primary B cells from peripheral blood blood
21 chr2:231404400-231408400 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
22 chr2:231404400-231408400 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
23 chr2:231404400-231409800 Weak transcription Primary T killer memory cells from peripheral blood blood
24 chr2:231404400-231410000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
25 chr2:231404600-231409000 Strong transcription Primary T regulatory cells fromperipheralblood blood
26 chr2:231404600-231416400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
27 chr2:231404800-231408800 Strong transcription Primary T helper cells PMA-I stimulated --
28 chr2:231404800-231410800 Weak transcription Muscle Satellite Cultured Cells --
29 chr2:231405000-231409800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
30 chr2:231405200-231407600 Weak transcription Duodenum Mucosa Duodenum
31 chr2:231405200-231408800 Strong transcription Primary T helper cells fromperipheralblood blood
32 chr2:231405400-231409800 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
33 chr2:231405400-231411600 Weak transcription Placenta Placenta
34 chr2:231405400-231411800 Weak transcription Primary hematopoietic stem cells short term culture blood
35 chr2:231405600-231408400 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
36 chr2:231405600-231408600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
37 chr2:231405600-231408800 Strong transcription Primary T killer naive cells fromperipheralblood blood
38 chr2:231405600-231409000 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
39 chr2:231405600-231409000 Strong transcription Duodenum Smooth Muscle Duodenum
40 chr2:231405600-231410200 Strong transcription Primary hematopoietic stem cells blood
41 chr2:231405800-231415000 Weak transcription Gastric stomach
42 chr2:231406000-231408400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
43 chr2:231406000-231408600 Strong transcription Liver Liver
44 chr2:231406200-231407600 Enhancers HSMMtube muscle
45 chr2:231406400-231409400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
46 chr2:231406400-231410200 Weak transcription Thymus Thymus
47 chr2:231406600-231408800 Strong transcription Rectal Mucosa Donor 29 rectum
48 chr2:231406800-231407800 Flanking Active TSS GM12878-XiMat blood
49 chr2:231406800-231408200 Weak transcription Ovary ovary
50 chr2:231406800-231408200 Weak transcription Spleen Spleen

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Last update: Aug 31, 2015