The 2.0 version of rSNPBase

Variant report

Variant rs836239
Chromosome Location chr2:231408281-231408282
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:66 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:231371000-231409800 Weak transcription Skeletal Muscle Male skeletal muscle
2 chr2:231390800-231409200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
3 chr2:231401000-231430200 Weak transcription Pancreas Pancrea
4 chr2:231401400-231408600 Weak transcription Colon Smooth Muscle Colon
5 chr2:231401800-231409200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
6 chr2:231403200-231410200 Strong transcription Primary B cells from cord blood blood
7 chr2:231403600-231408600 Weak transcription Fetal Adrenal Gland Adrenal Gland
8 chr2:231403800-231408800 Strong transcription Primary T cells fromperipheralblood blood
9 chr2:231403800-231409600 Strong transcription Primary neutrophils fromperipheralblood blood
10 chr2:231404000-231408400 Strong transcription Primary T helper 17 cells PMA-I stimulated --
11 chr2:231404000-231409000 Strong transcription Primary T cells from cord blood blood
12 chr2:231404000-231409000 Strong transcription Monocytes-CD14+_RO01746 blood
13 chr2:231404000-231417200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
14 chr2:231404200-231409000 Strong transcription Adipose Nuclei Adipose
15 chr2:231404200-231409200 Strong transcription Primary monocytes fromperipheralblood blood
16 chr2:231404200-231409400 Strong transcription Primary T helper naive cells fromperipheralblood blood
17 chr2:231404200-231409600 Weak transcription Rectal Mucosa Donor 31 rectum
18 chr2:231404200-231410200 Strong transcription Primary B cells from peripheral blood blood
19 chr2:231404400-231408400 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
20 chr2:231404400-231408400 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
21 chr2:231404400-231409800 Weak transcription Primary T killer memory cells from peripheral blood blood
22 chr2:231404400-231410000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
23 chr2:231404600-231409000 Strong transcription Primary T regulatory cells fromperipheralblood blood
24 chr2:231404600-231416400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
25 chr2:231404800-231408800 Strong transcription Primary T helper cells PMA-I stimulated --
26 chr2:231404800-231410800 Weak transcription Muscle Satellite Cultured Cells --
27 chr2:231405000-231409800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
28 chr2:231405200-231408800 Strong transcription Primary T helper cells fromperipheralblood blood
29 chr2:231405400-231409800 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
30 chr2:231405400-231411600 Weak transcription Placenta Placenta
31 chr2:231405400-231411800 Weak transcription Primary hematopoietic stem cells short term culture blood
32 chr2:231405600-231408400 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
33 chr2:231405600-231408600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
34 chr2:231405600-231408800 Strong transcription Primary T killer naive cells fromperipheralblood blood
35 chr2:231405600-231409000 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
36 chr2:231405600-231409000 Strong transcription Duodenum Smooth Muscle Duodenum
37 chr2:231405600-231410200 Strong transcription Primary hematopoietic stem cells blood
38 chr2:231405800-231415000 Weak transcription Gastric stomach
39 chr2:231406000-231408400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
40 chr2:231406000-231408600 Strong transcription Liver Liver
41 chr2:231406400-231409400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
42 chr2:231406400-231410200 Weak transcription Thymus Thymus
43 chr2:231406600-231408800 Strong transcription Rectal Mucosa Donor 29 rectum
44 chr2:231406800-231408800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
45 chr2:231406800-231408800 Weak transcription Lung lung
46 chr2:231406800-231409000 Weak transcription Fetal Muscle Leg muscle
47 chr2:231406800-231410200 Weak transcription Fetal Thymus thymus
48 chr2:231406800-231411200 Weak transcription Aorta Aorta
49 chr2:231407000-231408400 Weak transcription Colonic Mucosa Colon
50 chr2:231407000-231408600 Weak transcription Skeletal Muscle Female skeletal muscle

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Last update: Aug 31, 2015