The 2.0 version of rSNPBase

Variant report

Variant rs6740016
Chromosome Location chr2:231409170-231409171
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:54 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:231371000-231409800 Weak transcription Skeletal Muscle Male skeletal muscle
2 chr2:231390800-231409200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
3 chr2:231401000-231430200 Weak transcription Pancreas Pancrea
4 chr2:231401800-231409200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
5 chr2:231403200-231410200 Strong transcription Primary B cells from cord blood blood
6 chr2:231403800-231409600 Strong transcription Primary neutrophils fromperipheralblood blood
7 chr2:231404000-231417200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
8 chr2:231404200-231409200 Strong transcription Primary monocytes fromperipheralblood blood
9 chr2:231404200-231409400 Strong transcription Primary T helper naive cells fromperipheralblood blood
10 chr2:231404200-231409600 Weak transcription Rectal Mucosa Donor 31 rectum
11 chr2:231404200-231410200 Strong transcription Primary B cells from peripheral blood blood
12 chr2:231404400-231409800 Weak transcription Primary T killer memory cells from peripheral blood blood
13 chr2:231404400-231410000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
14 chr2:231404600-231416400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
15 chr2:231404800-231410800 Weak transcription Muscle Satellite Cultured Cells --
16 chr2:231405000-231409800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
17 chr2:231405400-231409800 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
18 chr2:231405400-231411600 Weak transcription Placenta Placenta
19 chr2:231405400-231411800 Weak transcription Primary hematopoietic stem cells short term culture blood
20 chr2:231405600-231410200 Strong transcription Primary hematopoietic stem cells blood
21 chr2:231405800-231415000 Weak transcription Gastric stomach
22 chr2:231406400-231409400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
23 chr2:231406400-231410200 Weak transcription Thymus Thymus
24 chr2:231406800-231410200 Weak transcription Fetal Thymus thymus
25 chr2:231406800-231411200 Weak transcription Aorta Aorta
26 chr2:231407000-231409600 Weak transcription Placenta Amnion Placenta Amnion
27 chr2:231407000-231409600 Weak transcription Stomach Smooth Muscle stomach
28 chr2:231407000-231410000 Weak transcription Rectal Smooth Muscle rectum
29 chr2:231407000-231417200 Weak transcription Primary T helper naive cells from peripheral blood blood
30 chr2:231407200-231411000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
31 chr2:231407200-231417200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
32 chr2:231407600-231410600 Weak transcription HSMMtube muscle
33 chr2:231408000-231415000 Weak transcription GM12878-XiMat blood
34 chr2:231408400-231409800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
35 chr2:231408400-231410000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
36 chr2:231408400-231411000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
37 chr2:231408600-231410200 Weak transcription Duodenum Mucosa Duodenum
38 chr2:231408600-231410400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
39 chr2:231408600-231410400 Weak transcription Liver Liver
40 chr2:231408600-231411000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
41 chr2:231408600-231414200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
42 chr2:231408800-231409400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
43 chr2:231408800-231410400 Weak transcription Rectal Mucosa Donor 29 rectum
44 chr2:231408800-231412200 Weak transcription Left Ventricle heart
45 chr2:231408800-231413400 Weak transcription Primary T cells fromperipheralblood blood
46 chr2:231408800-231414400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
47 chr2:231408800-231417000 Weak transcription Primary T helper cells PMA-I stimulated --
48 chr2:231408800-231417200 Weak transcription Primary T helper cells fromperipheralblood blood
49 chr2:231408800-231417200 Weak transcription Primary T killer naive cells fromperipheralblood blood
50 chr2:231409000-231409400 Weak transcription Primary T cells from cord blood blood

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Last update: Aug 31, 2015