Variant report
| Variant | rs67181930 |
|---|---|
| Chromosome Location | chr11:7965399-7965400 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
- TF binding region (count:2)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
(count:2 , 50 per page) page:
1
| No data |
| No data |
| No data |
| No data |
| No data |
| Variant related genes | Relation type |
|---|---|
| OR10A3 | TF binding region |
rSNPs within LD-proxies of this variant (count:23)
| rs_ID | r2[population] |
|---|---|
| rs11041703 | 1.00[ASN][1000 genomes] |
| rs11041704 | 1.00[ASN][1000 genomes] |
| rs11041705 | 1.00[ASN][1000 genomes] |
| rs12417944 | 0.87[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs12420107 | 0.81[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs12421289 | 1.00[ASN][1000 genomes] |
| rs1397596 | 1.00[ASN][1000 genomes] |
| rs1606069 | 0.86[EUR][1000 genomes] |
| rs2136906 | 0.86[EUR][1000 genomes] |
| rs4548609 | 1.00[ASN][1000 genomes] |
| rs4758263 | 1.00[ASN][1000 genomes] |
| rs56071931 | 0.87[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs56391804 | 1.00[ASN][1000 genomes] |
| rs56392532 | 1.00[ASN][1000 genomes] |
| rs57424199 | 1.00[ASN][1000 genomes] |
| rs61879577 | 1.00[ASN][1000 genomes] |
| rs66473380 | 0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs67238148 | 1.00[ASN][1000 genomes] |
| rs67876487 | 0.84[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs73412938 | 0.87[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs73412945 | 0.87[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs73412998 | 1.00[ASN][1000 genomes] |
| rs7951923 | 1.00[ASN][1000 genomes] |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr11:7958400-7966200 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
