Variant report

Variant	rs67193056
Chromosome Location	chr8:49572735-49572736
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs10087993	0.82[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs16938333	0.82[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs16938348	0.93[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs2004390	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4582590	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57572174	1.00[EUR][1000 genomes]
rs66764967	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs6999204	0.82[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7823285	1.00[EUR][1000 genomes]
rs878995	0.82[EUR][1000 genomes]

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:49563200-49572800	Weak transcription	Pancreas	Pancrea
2	chr8:49567400-49575800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
3	chr8:49570000-49584000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
4	chr8:49570200-49575200	Weak transcription	Fetal Lung	lung
5	chr8:49571400-49573400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
6	chr8:49571600-49572800	Flanking Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
7	chr8:49571600-49572800	Flanking Active TSS	NHEK	skin
8	chr8:49571800-49572800	Flanking Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
9	chr8:49572200-49577400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
10	chr8:49572400-49572800	Enhancers	Breast Myoepithelial Primary Cells	Breast
11	chr8:49572400-49573600	Enhancers	HMEC	breast

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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