Variant report

Variant	rs67344309
Chromosome Location	chr3:86154807-86154808
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs12629171	0.95[ASN][1000 genomes]
rs12633845	1.00[ASN][1000 genomes]
rs12635434	0.91[ASN][1000 genomes]
rs55982437	0.95[ASN][1000 genomes]
rs6772504	0.81[ASN][1000 genomes]
rs6806149	0.95[ASN][1000 genomes]
rs73138178	0.91[EUR][1000 genomes]
rs73138180	0.91[EUR][1000 genomes]
rs73138198	0.82[EUR][1000 genomes]
rs73843571	0.95[ASN][1000 genomes]
rs73843573	0.95[ASN][1000 genomes]
rs73845770	0.90[ASN][1000 genomes]
rs7617889	0.95[ASN][1000 genomes]
rs7629531	0.95[ASN][1000 genomes]
rs9809272	0.81[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv532629	chr3:85763873-86608579	Enhancers Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Bivalent Enhancer Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:86153200-86155000	Enhancers	HUES48 Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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