Variant report

Variant	rs6734996
Chromosome Location	chr2:173158301-173158302
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr2:173153428..173155643-chr2:173156637..173159009,2	MCF-7	breast:
2	chr2:173156581..173161480-chr2:173162847..173166156,5	MCF-7	breast:

rs_ID	r²[population]
rs10182215	0.94[AFR][1000 genomes]
rs13388028	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs13401476	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs13421906	0.94[AFR][1000 genomes]
rs6752598	0.94[AFR][1000 genomes]

Chromatin state (count:24 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:173150400-173158400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
2	chr2:173150400-173158400	Weak transcription	Brain Substantia Nigra	brain
3	chr2:173150800-173158600	Weak transcription	Brain Hippocampus Middle	brain
4	chr2:173151400-173158600	Weak transcription	Sigmoid Colon	Sigmoid Colon
5	chr2:173151400-173168000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
6	chr2:173153000-173158800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
7	chr2:173153200-173158600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
8	chr2:173153400-173158400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
9	chr2:173153600-173158400	Weak transcription	Ovary	ovary
10	chr2:173153600-173158400	Weak transcription	HMEC	breast
11	chr2:173153600-173158600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
12	chr2:173153600-173158600	Weak transcription	Stomach Mucosa	stomach
13	chr2:173153600-173158800	Weak transcription	Brain Anterior Caudate	brain
14	chr2:173153600-173160800	Weak transcription	Right Atrium	heart
15	chr2:173153800-173158400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
16	chr2:173153800-173158600	Weak transcription	Duodenum Mucosa	Duodenum
17	chr2:173154000-173158800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
18	chr2:173158000-173160800	Enhancers	Breast Myoepithelial Primary Cells	Breast
19	chr2:173158200-173158800	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
20	chr2:173158200-173159000	Enhancers	Fetal Kidney	kidney
21	chr2:173158200-173159200	Enhancers	Primary hematopoietic stem cells short term culture	blood
22	chr2:173158200-173159200	Enhancers	Fetal Muscle Leg	muscle
23	chr2:173158200-173159200	Enhancers	Rectal Mucosa Donor 29	rectum
24	chr2:173158200-173160800	Enhancers	Pancreas	Pancrea

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