Variant report

Variant	rs67361810
Chromosome Location	chr17:67488838-67488839
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs12948059	0.92[ASN][1000 genomes]
rs16974063	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs16974102	1.00[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs57439413	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57473471	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58357732	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs60663624	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs66517015	1.00[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs66963653	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs67260667	1.00[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs67953371	0.93[ASN][1000 genomes]
rs72850506	0.92[ASN][1000 genomes]
rs73363653	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs73363661	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73363663	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:52 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr17:67420000-67498200	Weak transcription	Thymus	Thymus
2	chr17:67450200-67512600	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
3	chr17:67479400-67497000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
4	chr17:67482000-67497000	Weak transcription	Right Atrium	heart
5	chr17:67482200-67497800	Weak transcription	Primary hematopoietic stem cells	blood
6	chr17:67483200-67496200	Weak transcription	Small Intestine	intestine
7	chr17:67483600-67497000	Weak transcription	Duodenum Mucosa	Duodenum
8	chr17:67484200-67492800	Weak transcription	Primary T cells from cord blood	blood
9	chr17:67485000-67501800	Weak transcription	Primary T helper cells fromperipheralblood	blood
10	chr17:67486800-67497000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
11	chr17:67487800-67489200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
12	chr17:67488000-67489000	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
13	chr17:67488000-67489200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
14	chr17:67488000-67489400	Enhancers	ES-WA7 Cell Line	embryonic stem cell
15	chr17:67488000-67489600	Enhancers	NHDF-Ad	bronchial
16	chr17:67488200-67489000	Enhancers	HUES64 Cell Line	embryonic stem cell
17	chr17:67488200-67489200	Enhancers	ES-I3 Cell Line	embryonic stem cell
18	chr17:67488200-67489200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
19	chr17:67488200-67489400	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
20	chr17:67488200-67489600	Enhancers	Rectal Mucosa Donor 31	rectum
21	chr17:67488400-67489000	Enhancers	HUES48 Cell Line	embryonic stem cell
22	chr17:67488400-67489000	Enhancers	Muscle Satellite Cultured Cells	--
23	chr17:67488400-67489000	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
24	chr17:67488400-67489000	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
25	chr17:67488400-67489000	Enhancers	Placenta Amnion	Placenta Amnion
26	chr17:67488400-67489000	Flanking Active TSS	A549	lung
27	chr17:67488400-67489000	Enhancers	Osteobl	bone
28	chr17:67488400-67489200	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
29	chr17:67488400-67489200	Enhancers	HUES6 Cell Line	embryonic stem cell
30	chr17:67488400-67489200	Enhancers	Placenta	Placenta
31	chr17:67488400-67489200	Enhancers	Skeletal Muscle Male	skeletal muscle
32	chr17:67488400-67489200	Enhancers	Hela-S3	cervix
33	chr17:67488400-67489200	Enhancers	HMEC	breast
34	chr17:67488400-67489200	Enhancers	NH-A	brain
35	chr17:67488600-67489000	Enhancers	H9 Cell Line	embryonic stem cell
36	chr17:67488600-67489000	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
37	chr17:67488600-67489000	Enhancers	iPS-15b Cell Line	embryonic stem cell
38	chr17:67488600-67489000	Enhancers	iPS-18 Cell Line	embryonic stem cell
39	chr17:67488600-67489000	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
40	chr17:67488600-67489000	Enhancers	Adipose Nuclei	Adipose
41	chr17:67488600-67489000	Enhancers	Colon Smooth Muscle	Colon
42	chr17:67488600-67489000	Enhancers	Fetal Muscle Leg	muscle
43	chr17:67488600-67489000	Enhancers	Sigmoid Colon	Sigmoid Colon
44	chr17:67488600-67489000	Enhancers	NHEK	skin
45	chr17:67488600-67489200	Enhancers	Psoas Muscle	Psoas
46	chr17:67488600-67489200	Enhancers	Skeletal Muscle Female	skeletal muscle
47	chr17:67488600-67489200	Enhancers	HSMM	muscle
48	chr17:67488600-67489400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
49	chr17:67488600-67489800	Enhancers	Breast Myoepithelial Primary Cells	Breast
50	chr17:67488600-67490800	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell

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