The 2.0 version of rSNPBase

Variant report

Variant rs6746079
Chromosome Location chr2:153514689-153514690
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:153472000-153522000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr2:153495400-153517400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
3 chr2:153497000-153531800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr2:153497200-153521200 Weak transcription Esophagus oesophagus
5 chr2:153497400-153516200 Weak transcription Spleen Spleen
6 chr2:153500400-153517200 Weak transcription Hela-S3 cervix
7 chr2:153501400-153531800 Weak transcription Aorta Aorta
8 chr2:153504400-153538200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
9 chr2:153504600-153514800 Weak transcription Fetal Heart heart
10 chr2:153504600-153516000 Weak transcription Fetal Intestine Small intestine
11 chr2:153505000-153515200 Weak transcription Ovary ovary
12 chr2:153505000-153516800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr2:153505000-153517400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
14 chr2:153505000-153517400 Weak transcription Gastric stomach
15 chr2:153505000-153517400 Weak transcription Right Ventricle heart
16 chr2:153505000-153540200 Strong transcription Fetal Thymus thymus
17 chr2:153505200-153514800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
18 chr2:153505400-153517000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
19 chr2:153505400-153539200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
20 chr2:153505400-153540200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
21 chr2:153505600-153515000 Weak transcription ES-I3 Cell Line embryonic stem cell
22 chr2:153505600-153516800 Weak transcription ES-WA7 Cell Line embryonic stem cell
23 chr2:153505600-153534400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
24 chr2:153505600-153537000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
25 chr2:153505600-153538400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
26 chr2:153506000-153538000 Strong transcription Liver Liver
27 chr2:153506200-153539800 Strong transcription iPS-20b Cell Line embryonic stem cell
28 chr2:153506200-153546800 Strong transcription Monocytes-CD14+_RO01746 blood
29 chr2:153507000-153523000 Strong transcription HUVEC blood vessel
30 chr2:153507000-153538400 Strong transcription Primary T helper cells fromperipheralblood blood
31 chr2:153507000-153541600 Strong transcription Primary hematopoietic stem cells short term culture blood
32 chr2:153507200-153538200 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
33 chr2:153507400-153530200 Weak transcription Pancreatic Islets Pancreatic Islet
34 chr2:153507600-153526800 Weak transcription Stomach Mucosa stomach
35 chr2:153508000-153542000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
36 chr2:153508000-153550800 Strong transcription Primary monocytes fromperipheralblood blood
37 chr2:153508200-153532800 Strong transcription HSMM muscle
38 chr2:153508200-153533600 Strong transcription Breast Myoepithelial Primary Cells Breast
39 chr2:153508400-153516000 Strong transcription HMEC breast
40 chr2:153508400-153517800 Strong transcription HepG2 liver
41 chr2:153508400-153537600 Strong transcription Rectal Mucosa Donor 29 rectum
42 chr2:153508400-153537800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
43 chr2:153508400-153538000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
44 chr2:153508400-153538200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
45 chr2:153508400-153538400 Strong transcription A549 lung
46 chr2:153508600-153529200 Strong transcription Primary T cells from cord blood blood
47 chr2:153508600-153539600 Strong transcription Dnd41 blood
48 chr2:153508800-153535000 Strong transcription Primary T cells fromperipheralblood blood
49 chr2:153508800-153540400 Strong transcription Primary hematopoietic stem cells blood
50 chr2:153509000-153539600 Strong transcription HUES64 Cell Line embryonic stem cell

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Last update: Aug 31, 2015