The 2.0 version of rSNPBase

Variant report

Variant rs13005368
Chromosome Location chr2:153558475-153558476
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:153523400-153571800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr2:153525000-153571800 Weak transcription Small Intestine intestine
3 chr2:153533400-153558600 Weak transcription Aorta Aorta
4 chr2:153533400-153571600 Weak transcription Brain Inferior Temporal Lobe brain
5 chr2:153533800-153572600 Weak transcription Fetal Brain Male brain
6 chr2:153536000-153572600 Weak transcription Placenta Amnion Placenta Amnion
7 chr2:153537400-153565400 Weak transcription H9 Cell Line embryonic stem cell
8 chr2:153537600-153571800 Weak transcription Brain Cingulate Gyrus brain
9 chr2:153539600-153571800 Weak transcription Brain Anterior Caudate brain
10 chr2:153539600-153572400 Weak transcription Brain Angular Gyrus brain
11 chr2:153539600-153572400 Weak transcription Pancreas Pancrea
12 chr2:153544400-153568200 Weak transcription Fetal Kidney kidney
13 chr2:153551200-153560200 Weak transcription Psoas Muscle Psoas
14 chr2:153551200-153561200 Weak transcription Rectal Mucosa Donor 31 rectum
15 chr2:153551200-153562800 Weak transcription Skeletal Muscle Female skeletal muscle
16 chr2:153551200-153563400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
17 chr2:153551200-153567200 Weak transcription Hela-S3 cervix
18 chr2:153551200-153568000 Weak transcription Ovary ovary
19 chr2:153551200-153571400 Weak transcription Brain Hippocampus Middle brain
20 chr2:153551200-153571800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
21 chr2:153551200-153571800 Weak transcription Brain Substantia Nigra brain
22 chr2:153551200-153572400 Weak transcription Rectal Smooth Muscle rectum
23 chr2:153551400-153562200 Weak transcription Pancreatic Islets Pancreatic Islet
24 chr2:153551400-153563000 Weak transcription iPS-18 Cell Line embryonic stem cell
25 chr2:153551400-153566400 Weak transcription HUVEC blood vessel
26 chr2:153551400-153568400 Weak transcription Duodenum Smooth Muscle Duodenum
27 chr2:153551400-153571800 Weak transcription HSMMtube muscle
28 chr2:153552400-153567400 Weak transcription Colon Smooth Muscle Colon
29 chr2:153552600-153559600 Weak transcription Primary T killer memory cells from peripheral blood blood
30 chr2:153554000-153558800 Weak transcription Fetal Heart heart
31 chr2:153554200-153566800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
32 chr2:153554400-153560400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
33 chr2:153554400-153561800 Weak transcription Primary T killer naive cells fromperipheralblood blood
34 chr2:153554400-153565000 Weak transcription Osteobl bone
35 chr2:153554600-153560800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
36 chr2:153556800-153559800 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
37 chr2:153556800-153559800 Strong transcription A549 lung
38 chr2:153556800-153568800 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
39 chr2:153557200-153559200 Strong transcription Thymus Thymus
40 chr2:153557200-153560400 Strong transcription Dnd41 blood
41 chr2:153557200-153570000 Strong transcription HepG2 liver
42 chr2:153557400-153559800 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
43 chr2:153557400-153559800 Strong transcription Fetal Adrenal Gland Adrenal Gland
44 chr2:153557600-153558800 Strong transcription ES-I3 Cell Line embryonic stem cell
45 chr2:153557600-153558800 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
46 chr2:153557600-153559200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
47 chr2:153557600-153559400 ZNF genes & repeats Primary monocytes fromperipheralblood blood
48 chr2:153557600-153559600 Strong transcription Primary T helper cells fromperipheralblood blood
49 chr2:153557600-153559600 ZNF genes & repeats NHEK skin
50 chr2:153557600-153559800 Strong transcription Primary T cells from cord blood blood

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Last update: Aug 31, 2015