The 2.0 version of rSNPBase

Variant report

Variant rs7558920
Chromosome Location chr2:153586299-153586300
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:108 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:153575800-153587200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr2:153575800-153611600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr2:153575800-153611600 Weak transcription Esophagus oesophagus
4 chr2:153575800-153621400 Weak transcription Pancreas Pancrea
5 chr2:153576000-153594400 Weak transcription Left Ventricle heart
6 chr2:153576000-153615800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
7 chr2:153576200-153594800 Weak transcription ES-WA7 Cell Line embryonic stem cell
8 chr2:153576600-153587000 Weak transcription Placenta Placenta
9 chr2:153576800-153587200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
10 chr2:153576800-153591400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
11 chr2:153576800-153592600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
12 chr2:153576800-153592800 Weak transcription NH-A brain
13 chr2:153577000-153586400 Weak transcription NHEK skin
14 chr2:153577000-153587200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
15 chr2:153577000-153592600 Weak transcription Fetal Intestine Large intestine
16 chr2:153577000-153592800 Weak transcription Skeletal Muscle Male skeletal muscle
17 chr2:153577000-153593000 Weak transcription Placenta Amnion Placenta Amnion
18 chr2:153577000-153593000 Weak transcription Osteobl bone
19 chr2:153577000-153594400 Weak transcription Aorta Aorta
20 chr2:153577000-153594600 Weak transcription H9 Cell Line embryonic stem cell
21 chr2:153577000-153595000 Weak transcription Stomach Smooth Muscle stomach
22 chr2:153577200-153586400 Weak transcription Primary T cells from cord blood blood
23 chr2:153577200-153587000 Weak transcription Primary hematopoietic stem cells blood
24 chr2:153577200-153592800 Weak transcription Brain Anterior Caudate brain
25 chr2:153577200-153593000 Weak transcription Fetal Kidney kidney
26 chr2:153577200-153593000 Weak transcription Skeletal Muscle Female skeletal muscle
27 chr2:153577200-153593400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
28 chr2:153577200-153594200 Weak transcription Brain Hippocampus Middle brain
29 chr2:153577200-153594600 Weak transcription Spleen Spleen
30 chr2:153577200-153617600 Weak transcription Rectal Smooth Muscle rectum
31 chr2:153577400-153586400 Weak transcription Primary T killer memory cells from peripheral blood blood
32 chr2:153577400-153587200 Weak transcription Thymus Thymus
33 chr2:153577400-153593000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
34 chr2:153577400-153593400 Weak transcription Duodenum Smooth Muscle Duodenum
35 chr2:153577600-153587000 Weak transcription Fetal Thymus thymus
36 chr2:153577600-153587200 Weak transcription Sigmoid Colon Sigmoid Colon
37 chr2:153577600-153594200 Weak transcription Fetal Intestine Small intestine
38 chr2:153577600-153617800 Weak transcription NHLF lung
39 chr2:153577800-153592800 Weak transcription ES-I3 Cell Line embryonic stem cell
40 chr2:153577800-153593000 Weak transcription Fetal Muscle Leg muscle
41 chr2:153577800-153593000 Weak transcription Ovary ovary
42 chr2:153577800-153594800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
43 chr2:153578200-153586400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
44 chr2:153578200-153593400 Weak transcription Cortex derived primary cultured neurospheres brain
45 chr2:153578400-153586800 Weak transcription Primary T helper naive cells fromperipheralblood blood
46 chr2:153578400-153587200 Weak transcription Adipose Nuclei Adipose
47 chr2:153578400-153591400 Weak transcription Breast Myoepithelial Primary Cells Breast
48 chr2:153578400-153591800 Weak transcription Rectal Mucosa Donor 31 rectum
49 chr2:153578600-153605800 Weak transcription Fetal Heart heart
50 chr2:153578800-153591600 Weak transcription Liver Liver

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Last update: Aug 31, 2015