Variant report

Variant	rs67607644
Chromosome Location	chr4:78416124-78416125
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs10518177	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12501028	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12504012	0.85[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs12504958	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12508391	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12508421	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12644845	0.83[EUR][1000 genomes]
rs12644936	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs12645380	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12647991	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs12648073	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs12649862	0.85[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs13119926	0.85[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs34649706	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs34938732	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs41476645	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs71609310	0.88[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs7689830	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3434529	chr4:78388030-78470631	Enhancers ZNF genes & repeats Active TSS Bivalent Enhancer Flanking Active TSS Weak transcription	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:78414000-78419000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
2	chr4:78415400-78424400	Weak transcription	Primary hematopoietic stem cells	blood
3	chr4:78415600-78418800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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