Variant report

Variant	rs67647956
Chromosome Location	chr8:125307800-125307801
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 33 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:32)

rs_ID	r²[population]
rs10097723	0.86[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10107999	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16899526	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28600111	0.86[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4295647	0.81[ASN][1000 genomes]
rs5006381	1.00[ASN][1000 genomes]
rs55997863	1.00[ASN][1000 genomes]
rs56274121	1.00[ASN][1000 genomes]
rs61733521	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6470239	0.84[ASN][1000 genomes]
rs66579093	0.95[AFR][1000 genomes]
rs66622109	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs66726154	0.86[ASN][1000 genomes]
rs72710855	0.82[ASN][1000 genomes]
rs72710858	0.82[ASN][1000 genomes]
rs72710860	0.82[ASN][1000 genomes]
rs72710862	0.82[ASN][1000 genomes]
rs72710871	0.81[ASN][1000 genomes]
rs72711165	0.86[ASN][1000 genomes]
rs72711178	0.81[ASN][1000 genomes]
rs72711182	0.82[ASN][1000 genomes]
rs72711187	0.82[ASN][1000 genomes]
rs72711189	0.84[ASN][1000 genomes]
rs72711190	0.84[ASN][1000 genomes]
rs72711193	0.84[ASN][1000 genomes]
rs72711199	0.82[ASN][1000 genomes]
rs72711201	0.82[ASN][1000 genomes]
rs72721415	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72721416	1.00[ASN][1000 genomes]
rs72721431	0.86[ASN][1000 genomes]
rs72721433	0.86[ASN][1000 genomes]
rs72721442	0.86[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2762769	chr8:125167256-125480574	Weak transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Enhancers Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	33 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:125301400-125329800	Weak transcription	HSMMtube	muscle
2	chr8:125304400-125313600	Weak transcription	Left Ventricle	heart
3	chr8:125304600-125317800	Weak transcription	Fetal Heart	heart
4	chr8:125306200-125328000	Weak transcription	A549	lung

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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