Variant report

Variant	rs6765306
Chromosome Location	chr3:100298492-100298493
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs56162336	1.00[EUR][1000 genomes]
rs56393938	1.00[EUR][1000 genomes]
rs57755171	1.00[EUR][1000 genomes]
rs58548186	1.00[EUR][1000 genomes]
rs58681466	1.00[EUR][1000 genomes]
rs59488617	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs61153044	1.00[EUR][1000 genomes]
rs6441330	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6767288	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6804450	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72941501	1.00[EUR][1000 genomes]
rs72943211	1.00[EUR][1000 genomes]
rs72943217	1.00[EUR][1000 genomes]
rs7430040	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9866409	1.00[EUR][1000 genomes]

No data

Chromatin state (count:24 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:100241000-100299800	Weak transcription	Fetal Muscle Leg	muscle
2	chr3:100265800-100300600	Weak transcription	HepG2	liver
3	chr3:100276800-100309200	Weak transcription	NH-A	brain
4	chr3:100277600-100304200	Weak transcription	Ovary	ovary
5	chr3:100278200-100305800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
6	chr3:100281200-100300200	Weak transcription	Osteobl	bone
7	chr3:100283400-100300400	Weak transcription	Muscle Satellite Cultured Cells	--
8	chr3:100283800-100299800	Weak transcription	Primary neutrophils fromperipheralblood	blood
9	chr3:100288200-100298600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
10	chr3:100289400-100299400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
11	chr3:100289600-100300200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
12	chr3:100289600-100301000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
13	chr3:100289800-100298600	Weak transcription	Aorta	Aorta
14	chr3:100289800-100298800	Weak transcription	Fetal Lung	lung
15	chr3:100290200-100300000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
16	chr3:100295600-100298800	Strong transcription	Placenta Amnion	Placenta Amnion
17	chr3:100296000-100298800	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
18	chr3:100297200-100300600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
19	chr3:100297400-100300400	Weak transcription	Duodenum Mucosa	Duodenum
20	chr3:100297600-100298800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
21	chr3:100297600-100303400	Weak transcription	Fetal Stomach	stomach
22	chr3:100297800-100300200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
23	chr3:100297800-100300400	Weak transcription	Liver	Liver
24	chr3:100298400-100298600	Enhancers	Pancreas	Pancrea

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