The 2.0 version of rSNPBase

Variant report

Variant rs9866409
Chromosome Location chr3:100279842-100279843
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:100241000-100299800 Weak transcription Fetal Muscle Leg muscle
2 chr3:100253800-100289000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr3:100253800-100289000 Weak transcription Aorta Aorta
4 chr3:100265800-100300600 Weak transcription HepG2 liver
5 chr3:100268400-100282200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr3:100270800-100291000 Weak transcription Colon Smooth Muscle Colon
7 chr3:100273400-100288600 Weak transcription Fetal Adrenal Gland Adrenal Gland
8 chr3:100273400-100297000 Weak transcription Pancreas Pancrea
9 chr3:100276000-100280200 Weak transcription Primary neutrophils fromperipheralblood blood
10 chr3:100276000-100282600 Weak transcription HSMMtube muscle
11 chr3:100276200-100280000 Weak transcription Primary monocytes fromperipheralblood blood
12 chr3:100276200-100280000 Weak transcription Monocytes-CD14+_RO01746 blood
13 chr3:100276800-100280000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
14 chr3:100276800-100282600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
15 chr3:100276800-100309200 Weak transcription NH-A brain
16 chr3:100277000-100280000 Weak transcription NHDF-Ad bronchial
17 chr3:100277000-100280200 Genic enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
18 chr3:100277000-100280400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
19 chr3:100277000-100281800 Weak transcription Placenta Amnion Placenta Amnion
20 chr3:100277200-100298000 Weak transcription Fetal Muscle Trunk muscle
21 chr3:100277400-100280400 Weak transcription Hela-S3 cervix
22 chr3:100277600-100281000 Enhancers Fetal Lung lung
23 chr3:100277600-100304200 Weak transcription Ovary ovary
24 chr3:100277800-100280000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
25 chr3:100278200-100281800 Weak transcription Fetal Heart heart
26 chr3:100278200-100305800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
27 chr3:100278600-100281400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
28 chr3:100279000-100281600 Enhancers HUES64 Cell Line embryonic stem cell
29 chr3:100279000-100281800 Enhancers iPS-20b Cell Line embryonic stem cell
30 chr3:100279200-100281200 Enhancers Fetal Kidney kidney
31 chr3:100279400-100281200 Enhancers Osteobl bone
32 chr3:100279400-100281400 Enhancers Fetal Stomach stomach
33 chr3:100279600-100280400 Enhancers HUES48 Cell Line embryonic stem cell
34 chr3:100279600-100280400 Enhancers iPS-18 Cell Line embryonic stem cell
35 chr3:100279600-100281000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
36 chr3:100279600-100281000 Enhancers Muscle Satellite Cultured Cells --
37 chr3:100279600-100281800 Enhancers iPS-15b Cell Line embryonic stem cell
38 chr3:100279600-100282200 Enhancers Liver Liver
39 chr3:100279800-100280000 Enhancers NHLF lung
40 chr3:100279800-100280600 Enhancers NHEK skin
41 chr3:100279800-100280800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
42 chr3:100279800-100280800 Enhancers HSMM muscle
43 chr3:100279800-100281600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
44 chr3:100279800-100282600 Enhancers HMEC breast

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Last update: Aug 31, 2015