Variant report

Variant	rs6777064
Chromosome Location	chr3:17823660-17823661
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr3:17822522..17824508-chr3:17834852..17837057,2	K562	blood:

Extended variants
information (count: 52 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:51)

rs_ID	r²[population]
rs11128860	0.85[AMR][1000 genomes]
rs11128861	0.85[AMR][1000 genomes]
rs11128862	0.85[AMR][1000 genomes]
rs11128863	0.85[AMR][1000 genomes]
rs11128864	0.85[AMR][1000 genomes]
rs11128867	0.85[AMR][1000 genomes]
rs11128868	0.85[AMR][1000 genomes]
rs11128870	0.85[AMR][1000 genomes]
rs11916141	0.85[AMR][1000 genomes]
rs11924147	1.00[AMR][1000 genomes]
rs11925066	0.85[AMR][1000 genomes]
rs11925226	1.00[AMR][1000 genomes]
rs11926087	0.85[AMR][1000 genomes]
rs11927436	0.85[AMR][1000 genomes]
rs11927611	0.85[AMR][1000 genomes]
rs11929046	1.00[AMR][1000 genomes]
rs12107061	1.00[AMR][1000 genomes]
rs12107652	0.85[AMR][1000 genomes]
rs17044038	0.85[AMR][1000 genomes]
rs17044041	0.85[AMR][1000 genomes]
rs17044050	0.85[AMR][1000 genomes]
rs17044053	0.85[AMR][1000 genomes]
rs17044054	0.85[AMR][1000 genomes]
rs28456004	0.85[AMR][1000 genomes]
rs56726310	0.85[AMR][1000 genomes]
rs56777792	0.85[AMR][1000 genomes]
rs57816103	0.85[AMR][1000 genomes]
rs58042633	0.85[AMR][1000 genomes]
rs58280814	0.85[AMR][1000 genomes]
rs58921548	1.00[AMR][1000 genomes]
rs60245392	1.00[AMR][1000 genomes]
rs60744506	0.85[AMR][1000 genomes]
rs60838916	1.00[AMR][1000 genomes]
rs61601581	0.85[AMR][1000 genomes]
rs61650046	1.00[AMR][1000 genomes]
rs6577595	1.00[AMR][1000 genomes]
rs6763348	1.00[AMR][1000 genomes]
rs6772619	0.85[AMR][1000 genomes]
rs6780341	0.85[AMR][1000 genomes]
rs6785982	0.85[AMR][1000 genomes]
rs6786472	0.85[AMR][1000 genomes]
rs6793958	0.85[AMR][1000 genomes]
rs6794148	0.85[AMR][1000 genomes]
rs73168749	0.85[AMR][1000 genomes]
rs73168752	1.00[AMR][1000 genomes]
rs73168756	0.85[AMR][1000 genomes]
rs73168763	0.85[AMR][1000 genomes]
rs73168777	0.85[AMR][1000 genomes]
rs73172909	1.00[AMR][1000 genomes]
rs73172914	1.00[AMR][1000 genomes]
rs73172924	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv999594	chr3:17690416-17982318	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:17823000-17825200	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
2	chr3:17823400-17825800	Strong transcription	Dnd41	blood

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