The 2.0 version of rSNPBase

Variant report

Variant rs6783948
Chromosome Location chr3:111663554-111663555
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:78 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:111631000-111672000 Weak transcription Fetal Intestine Small intestine
2 chr3:111631000-111673400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
3 chr3:111635200-111665600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
4 chr3:111637200-111690600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
5 chr3:111639200-111675400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
6 chr3:111642200-111674400 Weak transcription Lung lung
7 chr3:111642200-111690400 Weak transcription Spleen Spleen
8 chr3:111645200-111663600 Weak transcription Skeletal Muscle Male skeletal muscle
9 chr3:111645400-111665400 Weak transcription Right Atrium heart
10 chr3:111645400-111689600 Weak transcription Skeletal Muscle Female skeletal muscle
11 chr3:111646400-111671000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
12 chr3:111648600-111674800 Weak transcription Psoas Muscle Psoas
13 chr3:111650200-111670000 Strong transcription Liver Liver
14 chr3:111652200-111665600 Weak transcription Small Intestine intestine
15 chr3:111652400-111685800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
16 chr3:111653000-111686200 Weak transcription Rectal Mucosa Donor 31 rectum
17 chr3:111653600-111664000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr3:111654400-111695000 Strong transcription Placenta Placenta
19 chr3:111654800-111667000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
20 chr3:111656600-111672000 Weak transcription ES-I3 Cell Line embryonic stem cell
21 chr3:111656600-111673200 Weak transcription Stomach Mucosa stomach
22 chr3:111656600-111674600 Weak transcription Sigmoid Colon Sigmoid Colon
23 chr3:111656600-111679200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
24 chr3:111657000-111665600 Strong transcription NH-A brain
25 chr3:111657000-111666200 Weak transcription Pancreatic Islets Pancreatic Islet
26 chr3:111657200-111665600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
27 chr3:111657200-111672600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
28 chr3:111657200-111682000 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
29 chr3:111657400-111665800 Strong transcription HSMM muscle
30 chr3:111657400-111673000 Strong transcription Osteobl bone
31 chr3:111657800-111674600 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
32 chr3:111658000-111664600 Strong transcription HUES64 Cell Line embryonic stem cell
33 chr3:111658000-111673000 Strong transcription Adipose Nuclei Adipose
34 chr3:111658000-111673200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
35 chr3:111658200-111669800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
36 chr3:111658600-111697400 Weak transcription Gastric stomach
37 chr3:111658800-111672600 Weak transcription Fetal Kidney kidney
38 chr3:111658800-111685800 Weak transcription HepG2 liver
39 chr3:111660200-111671600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
40 chr3:111660400-111665400 Weak transcription Colon Smooth Muscle Colon
41 chr3:111660400-111665400 Weak transcription Hela-S3 cervix
42 chr3:111660400-111667600 Weak transcription HSMMtube muscle
43 chr3:111660400-111671000 Weak transcription Fetal Heart heart
44 chr3:111660400-111672400 Weak transcription HUES48 Cell Line embryonic stem cell
45 chr3:111660600-111664200 Weak transcription Fetal Adrenal Gland Adrenal Gland
46 chr3:111660600-111665600 Weak transcription Rectal Smooth Muscle rectum
47 chr3:111660600-111667400 Weak transcription Duodenum Smooth Muscle Duodenum
48 chr3:111660600-111672400 Weak transcription HUES6 Cell Line embryonic stem cell
49 chr3:111660800-111664000 Weak transcription Right Ventricle heart
50 chr3:111660800-111671000 Weak transcription Fetal Stomach stomach

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Last update: Aug 31, 2015