The 2.0 version of rSNPBase

Variant report

Variant rs712520
Chromosome Location chr3:111681145-111681146
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:73 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:111637200-111690600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr3:111642200-111690400 Weak transcription Spleen Spleen
3 chr3:111645400-111689600 Weak transcription Skeletal Muscle Female skeletal muscle
4 chr3:111652400-111685800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
5 chr3:111653000-111686200 Weak transcription Rectal Mucosa Donor 31 rectum
6 chr3:111654400-111695000 Strong transcription Placenta Placenta
7 chr3:111657200-111682000 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
8 chr3:111658600-111697400 Weak transcription Gastric stomach
9 chr3:111658800-111685800 Weak transcription HepG2 liver
10 chr3:111661600-111689800 Weak transcription Ovary ovary
11 chr3:111663000-111681400 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
12 chr3:111663800-111681200 Strong transcription NHEK skin
13 chr3:111666600-111697400 Weak transcription Esophagus oesophagus
14 chr3:111670800-111685000 Strong transcription Liver Liver
15 chr3:111671000-111681800 Strong transcription NH-A brain
16 chr3:111672800-111686000 Weak transcription Fetal Intestine Small intestine
17 chr3:111673000-111681800 Weak transcription Muscle Satellite Cultured Cells --
18 chr3:111673000-111682000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
19 chr3:111673000-111688400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
20 chr3:111673000-111688400 Weak transcription Fetal Stomach stomach
21 chr3:111673000-111697400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
22 chr3:111673000-111697400 Weak transcription Pancreas Pancrea
23 chr3:111673400-111681200 Weak transcription Duodenum Smooth Muscle Duodenum
24 chr3:111673400-111681800 Strong transcription Osteobl bone
25 chr3:111673600-111686000 Weak transcription Fetal Kidney kidney
26 chr3:111673800-111682000 Weak transcription NHLF lung
27 chr3:111675000-111682600 Weak transcription Colon Smooth Muscle Colon
28 chr3:111675000-111697400 Weak transcription Lung lung
29 chr3:111675800-111685200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
30 chr3:111676400-111681800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
31 chr3:111676600-111682000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
32 chr3:111676800-111685800 Weak transcription Fetal Lung lung
33 chr3:111677200-111681600 Strong transcription HMEC breast
34 chr3:111677600-111681400 Weak transcription Fetal Adrenal Gland Adrenal Gland
35 chr3:111678000-111682000 Weak transcription HUVEC blood vessel
36 chr3:111678200-111683400 Strong transcription Left Ventricle heart
37 chr3:111678200-111687800 Weak transcription Right Ventricle heart
38 chr3:111678200-111692800 Weak transcription Aorta Aorta
39 chr3:111678400-111682800 Weak transcription HSMMtube muscle
40 chr3:111678400-111685600 Strong transcription Adipose Nuclei Adipose
41 chr3:111679400-111681400 Enhancers Fetal Heart heart
42 chr3:111680000-111681200 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
43 chr3:111680200-111682400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
44 chr3:111680200-111683200 Enhancers NHDF-Ad bronchial
45 chr3:111680400-111681200 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
46 chr3:111680400-111681400 Strong transcription Hela-S3 cervix
47 chr3:111680400-111683600 Genic enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
48 chr3:111680600-111681200 Enhancers Fetal Thymus thymus
49 chr3:111680600-111681200 Strong transcription Placenta Amnion Placenta Amnion
50 chr3:111680600-111681200 Enhancers Thymus Thymus

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Last update: Aug 31, 2015