The 2.0 version of rSNPBase

Variant report

Variant rs6791102
Chromosome Location chr3:100131238-100131239
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:53 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:100122000-100143800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr3:100122400-100132400 Weak transcription Primary T cells from cord blood blood
3 chr3:100122600-100132400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
4 chr3:100122600-100133600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr3:100122600-100149200 Weak transcription Left Ventricle heart
6 chr3:100122800-100131600 Weak transcription Skeletal Muscle Female skeletal muscle
7 chr3:100123000-100131600 Weak transcription Fetal Heart heart
8 chr3:100123000-100131600 Weak transcription HSMM muscle
9 chr3:100123000-100131800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
10 chr3:100123000-100132600 Weak transcription H9 Cell Line embryonic stem cell
11 chr3:100123000-100133600 Weak transcription Stomach Smooth Muscle stomach
12 chr3:100123200-100133600 Weak transcription A549 lung
13 chr3:100123200-100135400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
14 chr3:100123400-100132000 Weak transcription ES-I3 Cell Line embryonic stem cell
15 chr3:100123400-100132000 Weak transcription HUES64 Cell Line embryonic stem cell
16 chr3:100123400-100132000 Weak transcription iPS-20b Cell Line embryonic stem cell
17 chr3:100124200-100143600 Weak transcription Hela-S3 cervix
18 chr3:100126400-100133200 Weak transcription Brain Hippocampus Middle brain
19 chr3:100126400-100143200 Weak transcription Duodenum Mucosa Duodenum
20 chr3:100126600-100139800 Weak transcription Cortex derived primary cultured neurospheres brain
21 chr3:100127400-100131800 Weak transcription HUES48 Cell Line embryonic stem cell
22 chr3:100127400-100131800 Weak transcription Primary T helper naive cells fromperipheralblood blood
23 chr3:100127400-100132200 Weak transcription H1 Cell Line embryonic stem cell
24 chr3:100127400-100133000 Weak transcription Pancreatic Islets Pancreatic Islet
25 chr3:100127400-100134200 Weak transcription Gastric stomach
26 chr3:100127400-100139000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
27 chr3:100127400-100144200 Weak transcription Pancreas Pancrea
28 chr3:100127600-100131800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
29 chr3:100127600-100134800 Weak transcription Fetal Adrenal Gland Adrenal Gland
30 chr3:100127600-100137800 Weak transcription Primary hematopoietic stem cells short term culture blood
31 chr3:100127600-100146200 Weak transcription Ovary ovary
32 chr3:100127600-100148200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
33 chr3:100127800-100132000 Weak transcription iPS-15b Cell Line embryonic stem cell
34 chr3:100129400-100132400 ZNF genes & repeats Fetal Muscle Leg muscle
35 chr3:100129800-100131400 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
36 chr3:100129800-100131400 Strong transcription Fetal Stomach stomach
37 chr3:100130200-100131400 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
38 chr3:100130200-100135400 Weak transcription Fetal Intestine Large intestine
39 chr3:100130600-100131600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
40 chr3:100130600-100131600 Weak transcription Brain Germinal Matrix brain
41 chr3:100130600-100136000 Weak transcription Fetal Lung lung
42 chr3:100130600-100139000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
43 chr3:100130600-100142400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
44 chr3:100130600-100162800 Weak transcription Fetal Brain Male brain
45 chr3:100130800-100132400 Weak transcription Fetal Muscle Trunk muscle
46 chr3:100131000-100131400 Weak transcription HepG2 liver
47 chr3:100131000-100132200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
48 chr3:100131000-100132200 Enhancers Psoas Muscle Psoas
49 chr3:100131000-100139000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
50 chr3:100131200-100131800 Weak transcription Aorta Aorta

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Last update: Aug 31, 2015